DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG42327 and Ptp10D

DIOPT Version :9

Sequence 1:NP_001036706.2 Gene:CG42327 / 41401 FlyBaseID:FBgn0259227 Length:1429 Species:Drosophila melanogaster
Sequence 2:NP_996413.2 Gene:Ptp10D / 32115 FlyBaseID:FBgn0004370 Length:1990 Species:Drosophila melanogaster


Alignment Length:1606 Identity:345/1606 - (21%)
Similarity:551/1606 - (34%) Gaps:480/1606 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    87 TETQTASPKENLNVKQTT----------------AAF--------EKNESSNTTESHLNGAQVDP 127
            |.|....|..||:|:..:                .||        |.:.|.|.|....:......
  Fly   118 TITTAPDPPSNLSVQVRSGKNAIILWSPPTQGSYTAFKIKVLGLSEASSSYNRTFQVNDNTFQHS 182

  Fly   128 VKELKDTET---SADTVKE-ESSTTTTSQLDQNPTNVTDKKSTEAQFKDERLSKEILSTTTEQIL 188
            ||||....|   .|.|:.: :.|...||:      |.|.|.:|..:|        |:....|..|
  Fly   183 VKELTPGATYQVQAYTIYDGKESVAYTSR------NFTTKPNTPGKF--------IVWFRNETTL 233

  Fly   189 L------------------------TEKALQKYVVITNSPLRGEAQPEIK--------------- 214
            |                        .:..|  ||.....| .|.||...|               
  Fly   234 LVLWQPPYPAGIYTHYKVSIEPPDANDSVL--YVEKEGEP-PGPAQAAFKGLVPGRAYNISVQTM 295

  Fly   215 --DKTSKSATSEKSTLPLKPVTIEVPSTTTEGVFNTTTT--------RSSDHGRSMQYSSTTEES 269
              |:.|...|::..|:||:|:.:     |.:..|.|:.:        :........|.|..|...
  Fly   296 SEDEISLPTTAQYRTVPLRPLNV-----TFDRDFITSNSFRVLWEAPKGISEFDKYQVSVATTRR 355

  Fly   270 SRSSPASVTPMKLIPLPMTSTPSSTTSTSTPLPTTAVSFASNENVIEESTSKSEVRQLPEKRAKF 334
            ..:.|.|..|:........:.|..|.:       ..|...|.:.....:|....:|.||.:..:.
  Fly   356 QSTVPRSNEPVAFFDFRDIAEPGKTFN-------VIVKTVSGKVTSWPATGDVTLRPLPVRNLRS 413

  Fly   335 ISENSTNAQQLTLPNTAEVWSLAGMKAVPKAPLTTTTSVPLLNH---TDLANDIDMPLNKTELHK 396
            |:::.||...:|       |.        ..|.:|.....::.|   |...:...:..::|....
  Fly   414 INDDKTNTMIIT-------WE--------ADPASTQDEYRIVYHELETFNGDTSTLTTDRTRFTL 463

  Fly   397 EKNLLDWMNI-----AMLPLTPENRTEFVVRTTLDATEGATQATTEALVEETHS---------KS 447
            | :||...|.     |:......|.|...|.|          ..:..::|:..|         ||
  Fly   464 E-SLLPGRNYSLSVQAVSKKMESNETSIFVVT----------RPSSPIIEDLKSIRMGLNISWKS 517

  Fly   448 DITVGLEQDNVTTARTMPSTPDPGSMDLNMTTTTVRTQQLEVPLVKKMSDAANAKL-IEAVTEPQ 511
            |:....||..|..:|.       |:.||.    |.:|::..: ::|.:...|..:| :.||:...
  Fly   518 DVNSKQEQYEVLYSRN-------GTSDLR----TQKTKESRL-VIKNLQPGAGYELKVFAVSHDL 570

  Fly   512 RETEAATEAATFVTLPEKL----------------------ATFGITARVDSTQ----------T 544
            |....|...|.:...|..:                      ..:.|..|.||.|          |
  Fly   571 RSEPHAYFQAVYPNPPRNMTIETVRSNSVLVHWSPPESGEFTEYSIRYRTDSEQQWVRLPSVRST 635

  Fly   545 E------------LLNVTTAAAATESGEMSKANSTDTLSAMTS-TTTTTARPMSVEHVTPEQDME 596
            |            .:.|.|.:...||....:.|:|...:.::: .....:|.:::|...||..:|
  Fly   636 EADITDMTKGEKYTIQVNTVSFGVESPVPQEVNTTVPPNPVSNIIQLVDSRNITLEWPKPEGRVE 700

  Fly   597 ------------------------AATSLATTAA----------------TSSGTTEAAATSSTT 621
                                    :|..|:|...                |:|....:..||...
  Fly   701 SYILKWWPSDNPGRVQTKNVSENKSADDLSTVRVLIGELMPGVQYKFDIQTTSYGILSGITSLYP 765

  Fly   622 AATPVVSEAATAAEASATSEATTAATLSVATTAASTTEIAMKATQI--SNIRDDNDDNSNDVIVA 684
            ...|::......|......|..| .|||...|..|:::..:....:  :.|| |.:..:||    
  Fly   766 RTMPLIQSDVVVANGEKEDERDT-ITLSYTPTPQSSSKFDIYRFSLGDAEIR-DKEKLAND---- 824

  Fly   685 TTKFPESEQAATTASVEP------TTTSVSVRVAG---EVSTSIRPEIIVTSTRNSTIVDTSTSA 740
                  :::..|...:.|      |..:||..||.   :....:.||.| |....:.|.||..|.
  Fly   825 ------TDRKVTFTGLVPGRLYNITVWTVSGGVASLPIQRQDRLYPEPI-TQLHATNITDTEISL 882

  Fly   741 ---TSVATPTQTEIAQISNEVNLEAVTVKTRD--GLSDTNELRTAEKT---DNAVNNSVAITESD 797
               .........:||.::.: ||.|..:.||:  .:||....|....|   .:...:||..:.|.
  Fly   883 RWDLPKGEYNDFDIAYLTAD-NLLAQNMTTRNEITISDLRPHRNYTFTVVVRSGTESSVLRSSSP 946

  Fly   798 LGALATAVETNPTTTNSLLSDVSKLSKEHESSLETNNIGEAPPESTTPAAPATVAV--------- 853
            |.|..|..|..|          .::.:.|.:.::.:.|..   |.:.|::.|...:         
  Fly   947 LSASFTTNEAVP----------GRVERFHPTDVQPSEINF---EWSLPSSEANGVIRQFSIAYTN 998

  Fly   854 ---ATD---ESTAAPAATG-------GQEIVREGQHHDGQQVADEQDTEQQLAKTTMAVTTTTTS 905
               .||   :...:..|.|       |:..|.:.|.........|::..|     ||.:......
  Fly   999 INNLTDAGMQDFESEEAFGVIKNLKPGETYVFKIQAKTAIGFGPEREYRQ-----TMPILAPPRP 1058

  Fly   906 ATTTTTSTTTTTTETPLTTTTMQ----------------PVEISLLDDSTTTTTTTPAP------ 948
            |      |....||...:::|:|                ...|.:.:|.....:....|      
  Fly  1059 A------TQVVPTEVYRSSSTIQIRFRKNYFSDQNGQVRMYTIIVAEDDAKNASGLEMPSWLDVQ 1117

  Fly   949 ------------PVY-FESSTVASTTI-----------------RSSTTMLPETTTASTQSPSEM 983
                        |.| ||:.:|...||                 :|.||...: ..|.|.:....
  Fly  1118 SYSVWLPYQAIDPYYPFENRSVEDFTIGTENCDNHKIGYCNGPLKSGTTYRVK-VRAFTGADKFT 1181

  Fly   984 PPTFMAPYPNELDHMQTNAQDNGTDVNVIIAITVSVIGVVALILLVAFLYLMRKRQKQTSYGQRC 1048
            ...:..|       :||: |||   .::|:||||.:  .:.|:|||..|:..|:|       ..|
  Fly  1182 DTAYSFP-------IQTD-QDN---TSLIVAITVPL--TIILVLLVTLLFYKRRR-------NNC 1226

  Fly  1049 RPVSLDAYSLDNVSVLGSVRRKGRDMRASKRTYGNAAFDDPSLRHNLLTASELARFVERRSDVFE 1113
            |..:.|:.:.||:|:..||..:.|.:....       |.:   .:.|::|....||    |:.||
  Fly  1227 RKTTKDSRANDNMSLPDSVIEQNRPILIKN-------FAE---HYRLMSADSDFRF----SEEFE 1277

  Fly  1114 EF----RDVPQIIARADEVPPGC-EDKNRYANVIPLPETRVVLQRQGDDDKTEYINANYVRGPRD 1173
            |.    ||.|...|   ::|  | ..|||:.|::|...:|..||...||:.::|||||||.| .:
  Fly  1278 ELKHVGRDQPCTFA---DLP--CNRPKNRFTNILPYDHSRFKLQPVDDDEGSDYINANYVPG-HN 1336

  Fly  1174 APNYYIACQAPLESTTSDFWRMIWEQQSRVIIQATDLSENGIERCAEYLPPSATLDNHSSYGDYQ 1238
            :|..:|..|.||.||..|||||.||..||.|:..|...|.|.|:|.:|.|....   ...|||.:
  Fly  1337 SPREFIVTQGPLHSTRDDFWRMCWESNSRAIVMLTRCFEKGREKCDQYWPNDTV---PVFYGDIK 1398

  Fly  1239 VTLKHREVKDRYAISTLVLKRVDGEESRELTHYWY-KWPEAGVPAEEAPIIAMLLEARSSLKSYS 1302
            |.:.:......:.::..:|.|  |.|.|.|.|:.: .||:.|||.....::..:...|       
  Fly  1399 VQILNDSHYADWVMTEFMLCR--GSEQRILRHFHFTTWPDFGVPNPPQTLVRFVRAFR------- 1454

  Fly  1303 LEQANELREKSATLETSMDADGSKAEAGSTSSHEINGNISSRSGTRSQQGPLTVHCSPGTGRTGT 1367
                                                    .|.|  ::|.|:.||||.|.||:||
  Fly  1455 ----------------------------------------DRIG--AEQRPIVVHCSAGVGRSGT 1477

  Fly  1368 IIASDMAIRSLETPKRSVDIPQLVYYVRRGRASAVQTKEQYEFIYK 1413
            .|..|..::.:.| ...|||..:||.:|:.|...|||::||..|::
  Fly  1478 FITLDRILQQINT-SDYVDIFGIVYAMRKERVWMVQTEQQYICIHQ 1522

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42327NP_001036706.2 PTPc 1134..1415 CDD:238006 88/281 (31%)
Y_phosphatase 1134..1415 CDD:278528 88/281 (31%)
Ptp10DNP_996413.2 fn3 124..205 CDD:278470 17/80 (21%)
fn3 220..304 CDD:278470 15/94 (16%)
fn3 315..391 CDD:278470 14/87 (16%)
FN3 405..494 CDD:238020 20/104 (19%)
FN3 511..574 CDD:238020 18/74 (24%)
FN3 583..671 CDD:238020 13/87 (15%)
fn3 683..753 CDD:278470 9/69 (13%)
fn3 787..850 CDD:278470 16/74 (22%)
fn3 866..935 CDD:278470 17/70 (24%)
fn3 961..1043 CDD:278470 12/84 (14%)
PTPc 1272..1525 CDD:214550 99/316 (31%)
PTPc 1298..1525 CDD:238006 88/281 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR19134
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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