DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG42327 and Ptp4E

DIOPT Version :9

Sequence 1:NP_001036706.2 Gene:CG42327 / 41401 FlyBaseID:FBgn0259227 Length:1429 Species:Drosophila melanogaster
Sequence 2:NP_001162669.1 Gene:Ptp4E / 31425 FlyBaseID:FBgn0004368 Length:1767 Species:Drosophila melanogaster


Alignment Length:1498 Identity:311/1498 - (20%)
Similarity:516/1498 - (34%) Gaps:412/1498 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 QAMASTSTDPDIVKAPRESGIGREPVAIKAESDMFSSQTNIEDEKSAKTVDQTETQTASPKENLN 99
            |.|.|||.  .|...||         |...:|..|.....:|..::.:.|.:|...        |
  Fly   375 QVMLSTSR--RIFNVPR---------AANGDSVYFDYPDILEPGRTYEVVVKTIAD--------N 420

  Fly   100 VKQTTAAFEKNESSNTTESHLNGAQVDPVKELKDTETSADTVKEESSTTTTSQLDQNPTNVTDKK 164
            |....|:.|.........| |.|...|....|..:...|:|.:::|...:..:    .||.::..
  Fly   421 VNSWPASGEVTLRPRPVRS-LGGFLDDRSNALHISWEPAETGRQDSYRISYHE----QTNASEVP 480

  Fly   165 STEAQFKDERLSKEILSTTTEQILLTEKALQKYVVITNSPLRGEAQPEIKDKTSKSATSEKSTLP 229
            :......:.:::..:...|.:.:|    |.::|::...:..:|.|        |.::...:.|.|
  Fly   481 APFPVAAESQITTNLTEYTLDSLL----AGRRYLIAVQALSKGVA--------SNASDITRYTRP 533

  Fly   230 LKPVTIEVPSTTTEGVFNTTTTRSSDHGRSMQY------SSTTEESSRSS-----------PASV 277
            ..|:..|:.| ..:|:.  .:.||..:.|..:|      :.|.||.:.::           |.|.
  Fly   534 AAPLIQELRS-IDQGLM--LSWRSDVNSRQDRYEVHYQRNGTREERTMATNETSLTIHYLHPGSG 595

  Fly   278 TPMKL--IPLPMTSTPSSTTSTSTPLPTTAVSFAS------------------NENVIEESTSKS 322
            ..:|:  |...:.|.|.|......|.|...::..:                  :|.|:...|..|
  Fly   596 YEVKVHAISHGVRSEPHSYFQAVFPKPPQNLTLQTVHTNLVVLHWQAPEGSDFSEYVVRYRTDAS 660

  Fly   323 EVRQLPEKRAKFISENSTNAQQ-------LTLPNTAEVWSLAGMKA-------VPKAPLTTTTSV 373
                 |.:|...:.||....:.       |...||...    |:::       |...|...:..|
  Fly   661 -----PWQRISGLHENEARIKDMHYGERYLVQVNTVSF----GVESPHPLELNVTMPPQPVSNVV 716

  Fly   374 PLLNHTDLANDIDMPLNKTELHKEKNLLDWMNIAMLPLTPENRTEFVVRTTLDATEGATQATTEA 438
            ||::..:|.  ::.|  :.:.|.:...|.|.     |...|:|.||         :..||     
  Fly   717 PLVDSRNLT--LEWP--RPDGHVDFYTLKWW-----PTDEEDRVEF---------KNVTQ----- 758

  Fly   439 LVEETHSKSDITVGLEQDNVTTARTMPSTPDPGSMDLNMTTTTVRTQQLEVPLVKKMSDAANAKL 503
             :|:..|.|   |.:..::::..|.........|..:...||.:.|:.:  ||::.....|||  
  Fly   759 -LEDLSSPS---VRIPIEDLSPGRQYRFEVQASSNGIRSGTTHLSTRTM--PLIQSDVFIANA-- 815

  Fly   504 IEAVTEPQRETEAATEAATFVTLPEKLATFGITARVDSTQTELLNVTTAAAATESGEMSKANSTD 568
                ...|.:.|..|  .::...|           .|||:.::...:......:..| ..||.|:
  Fly   816 ----GHEQGQDETIT--LSYTPTP-----------ADSTRFDIYRFSMGDPTIKDKE-KLANDTE 862

  Fly   569 TLSAMTSTTTTTARPMSVEHVTPEQDMEAATSLATTAATSSGTTEAAATSSTTAATPVVSEAATA 633
                         |.:|...:||      ......|..|.||...:..........|:     ..
  Fly   863 -------------RKLSFSGLTP------GKLYNVTVWTVSGGVASLPVQRLYRLHPL-----PI 903

  Fly   634 AEASATSEATTAATLSVATTAASTTEIAMKATQISNIRDDNDDNSNDVIVATTKFPESEQAATTA 698
            ::..|...|....||.....|...|:..::....       |:.:..::...||..|    .|..
  Fly   904 SDLKAIQVAAREITLHWTAPAGEYTDFELQYLSA-------DEEAPQLLQNVTKNTE----ITLQ 957

  Fly   699 SVEP---TTTSVSVRVAGEVSTSIRPEIIVTSTRNSTIVDTSTSATSVATPTQTEIAQISN---- 756
            .:.|   .|.:|.|| :|.:..:...::.|::...|:...:::..|..|.|.:.:..|.|:    
  Fly   958 GLRPYHNYTFTVVVR-SGSIQGTDFADVSVSTLMRSSAPISASYQTLTAPPGKVDYFQPSDVQPG 1021

  Fly   757 EVNLE---------------AVTVKTRDGLSDTNELR-----TAEKTDNAV-NNSVAITESDLGA 800
            ||..|               .:|.:..|..:|.:...     |..|.|..| .|..........|
  Fly  1022 EVTFEWSLEPAEQHGPIDYFRITCQNADDAADVSSYEFPVNATQGKIDGLVPGNHYIFRIQAKSA 1086

  Fly   801 LATAVETNPTTTNSLLSDVSKLSKEHESSLETNNIGEAPP---ESTTPAAPATVAVATDESTAAP 862
            |....|.....|..:|                     |||   .|.||...:..:...:.|....
  Fly  1087 LGYGAEREHIQTMPIL---------------------APPVPEPSVTPLEVSRTSSTIEISFRQG 1130

  Fly   863 AATGGQEIVRE---------GQHHDGQQVADEQDTE--------QQLAKTTMAVTTTTTSATTTT 910
            ..:....:||.         |::..|.::...||.:        |.:......:|:..:..::..
  Fly  1131 YFSNAHGMVRSYTIIIAEDVGKNASGLEMPSWQDVQAYTVWLPYQAIEPYNPFLTSNGSRKSSLE 1195

  Fly   911 TSTTTTTTET-----------PLTTTTMQPVEISLLDDSTTTTTTTPAPPVYFESSTVASTTIRS 964
            ....|..|..           ||...|...::|....|....|.|..:.|:         ||.||
  Fly  1196 AEHFTIGTANCDKHQAGYCNGPLRAGTTYRIKIRAFTDEDKFTDTVYSSPI---------TTERS 1251

  Fly   965 STTMLPETTTASTQSPSEMPPTFMAPYPNELDHMQTNAQDNGTDVNVIIAITVSVIGVVALILLV 1029
            .|                                            ||:|.|||.:.:||::|:|
  Fly  1252 DT--------------------------------------------VIVAATVSAVLLVAMVLVV 1272

  Fly  1030 AFLYLMRKRQKQTSYGQRC---RPVSLDAYSLDNVSVL--GSVRRKGRDMRASKRTYGNAAFDDP 1089
            .:..            .||   |..|..|...|.::.|  |.: ...|.:...          |.
  Fly  1273 VYCQ------------HRCQLIRRASKLARMQDELAALPEGYI-TPNRPVHVK----------DF 1314

  Fly  1090 SLRHNLLTASELARFVERRSDVFEEFRDVPQIIARADEVPPGCEDKNRYANVIPLPETRVVLQRQ 1154
            |..:.:::|....||    |:.|||.:.|.:..|.:....|....|||:.|::|...:|..||..
  Fly  1315 SEHYRIMSADSDFRF----SEEFEELKHVGRDQACSFANLPCNRPKNRFTNILPYDHSRFKLQPV 1375

  Fly  1155 GDDDKTEYINANYVRGPRDAPNYYIACQAPLESTTSDFWRMIWEQQSRVIIQATDLSENGIERCA 1219
            .|||.::||||||:.| .::|..:|..|.||.||..:||||.||..||.|:..|...|.|.|:|.
  Fly  1376 DDDDGSDYINANYMPG-HNSPREFIVTQGPLHSTREEFWRMCWESNSRAIVMLTRCFEKGREKCD 1439

  Fly  1220 EYLPPSATLDNHSS-YGDYQVTLKHREVKDRYAISTLVLKRVDGEESRELTHYWY-KWPEAGVPA 1282
            :|.|    :|..:. |||.:|.|........::||..::.|  ..|||.:.|:.: .||:.|||.
  Fly  1440 QYWP----VDRVAMFYGDIKVQLIIDTHYHDWSISEFMVSR--NCESRIMRHFHFTTWPDFGVPE 1498

  Fly  1283 EEAPIIAMLLEARSSLKSYSLEQANELREKSATLETSMDADGSKAEAGSTSSHEINGNISSRSGT 1347
            ....::..:...|..:                                               ||
  Fly  1499 PPQSLVRFVRAFRDVI-----------------------------------------------GT 1516

  Fly  1348 RSQQGPLTVHCSPGTGRTGTIIASDMAIRSLETPKRS--VDIPQLVYYVRRGRASAVQTKEQYEF 1410
              ...|:.||||.|.||:||.||.|   |.|:...:|  |||..:|:.:|:.|...|||::||..
  Fly  1517 --DMRPIIVHCSAGVGRSGTFIALD---RILQHIHKSDYVDIFGIVFAMRKERVFMVQTEQQYVC 1576

  Fly  1411 IYK 1413
            |::
  Fly  1577 IHQ 1579

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42327NP_001036706.2 PTPc 1134..1415 CDD:238006 90/284 (32%)
Y_phosphatase 1134..1415 CDD:278528 90/284 (32%)
Ptp4ENP_001162669.1 FN3 151..242 CDD:238020
fn3 247..328 CDD:278470
fn3 343..417 CDD:278470 13/52 (25%)
fn3 443..525 CDD:278470 14/97 (14%)
FN3 548..611 CDD:238020 12/64 (19%)
FN3 620..706 CDD:238020 14/94 (15%)
fn3 708..796 CDD:278470 22/114 (19%)
fn3 824..886 CDD:278470 16/94 (17%)
fn3 902..978 CDD:278470 17/87 (20%)
fn3 1013..1092 CDD:278470 15/78 (19%)
UP_III_II 1106..>1248 CDD:297589 22/150 (15%)
PTPc 1329..1582 CDD:214550 98/314 (31%)
PTPc 1355..1582 CDD:238006 90/284 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR19134
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.