DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42327 and Ptpn20

DIOPT Version :9

Sequence 1:NP_001036706.2 Gene:CG42327 / 41401 FlyBaseID:FBgn0259227 Length:1429 Species:Drosophila melanogaster
Sequence 2:NP_001073618.1 Gene:Ptpn20 / 306281 RGDID:1309812 Length:421 Species:Rattus norvegicus


Alignment Length:481 Identity:116/481 - (24%)
Similarity:189/481 - (39%) Gaps:121/481 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   945 TPAPPVYFESSTVASTTIRSSTTMLPETTTASTQSPSEMPPTFMAPYPNELDHMQTNAQDNGTDV 1009
            ||..||:  .:.|.|.::::|..|       |..:..::    :.|.|.|.|:.:|         
  Rat    39 TPTKPVF--GNKVNSESVKTSHHM-------SFSNKYDL----VFPEPVESDNDET--------- 81

  Fly  1010 NVIIAITVSVIGVVALILLVAFLYLMRKRQKQTSYGQRCRPVSLDAYSLDNVSVLGSV-RRKGRD 1073
                                  |:.:|      ....|.|..|:|..|......:.:| .....|
  Rat    82 ----------------------LWDVR------DLSHRNRWSSVDPESAGPSKTVSTVLSESSTD 118

  Fly  1074 MRASKRTYGNAAFDDPSLRHNLLTAS--ELARFVERRS--DVFEEFRDVPQIIARADEVPPGCE- 1133
            ...|:|.....|...|.:.::...|:  :..:.::::.  |:..||.::.::|. .|:...|.| 
  Rat   119 TAVSERELTQLAQIRPLIFNSSSRAALRDCLKALQKKEELDIIREFLELEEMIP-PDDFKSGYEL 182

  Fly  1134 ---DKNRYANVIPLPETRVVLQRQGDDDKTEYINANYVRGPRDAPNY-YIACQAPLESTTSDFWR 1194
               |||||.:::|...|||.|.:..|     ||||:|:|.......| |||.|.||..|..|||:
  Rat   183 QNRDKNRYRDILPYDSTRVPLGKNKD-----YINASYIRIVNHEEEYFYIATQGPLPDTIEDFWQ 242

  Fly  1195 MIWEQQSRVIIQATDLSENGIERCAEYLPPSATLDNHSSYGDYQVTLKHREVKDRYAISTLVLKR 1259
            |:.|....||...|...|.|:.:|..|.|.|  |.....:..:.|.|::.::...:.|....:.:
  Rat   243 MVLENNCNVIAMITREIEGGVIKCCSYWPVS--LKEPLEFKHFHVLLENFQITQYFVIRIFQIVK 305

  Fly  1260 VDGEESRELTHYWY-KWPEAGVPAEEAPIIAMLLEARSSLKSYSLEQANELREKSATLETSMDAD 1323
            ....:|..:.|..: |||:.|.||.               ..:.::....:|:...|        
  Rat   306 KSTGKSHSVKHLQFIKWPDHGTPAS---------------ADFFIKYVRYVRKSHIT-------- 347

  Fly  1324 GSKAEAGSTSSHEINGNISSRSGTRSQQGPLTVHCSPGTGRTGTIIASDMAIRSLETPKRSVDIP 1388
                                        |||.||||.|.||||..|..|:...::| ...|.:|.
  Rat   348 ----------------------------GPLLVHCSAGVGRTGVFICVDVVFCTIE-KNYSFNIM 383

  Fly  1389 QLVYYVRRGRASAVQTKEQYEFIYKV 1414
            .:|..:|:.|...:||||||:|.|::
  Rat   384 NIVTQMRKQRFGMIQTKEQYQFCYEI 409

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42327NP_001036706.2 PTPc 1134..1415 CDD:238006 81/283 (29%)
Y_phosphatase 1134..1415 CDD:278528 81/283 (29%)
Ptpn20NP_001073618.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..58 6/20 (30%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 93..116 5/22 (23%)
PTPc 160..412 CDD:214550 87/310 (28%)
PTPc 186..412 CDD:238006 81/283 (29%)
Substrate binding. /evidence=ECO:0000250 354..360 3/5 (60%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0789
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.900

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