DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42327 and Ptpn18

DIOPT Version :9

Sequence 1:NP_001036706.2 Gene:CG42327 / 41401 FlyBaseID:FBgn0259227 Length:1429 Species:Drosophila melanogaster
Sequence 2:XP_038939136.1 Gene:Ptpn18 / 301333 RGDID:1311586 Length:459 Species:Rattus norvegicus


Alignment Length:315 Identity:96/315 - (30%)
Similarity:140/315 - (44%) Gaps:82/315 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly  1131 GCEDKNRYANVIPLPETRVVLQRQGDDDKTEYINANYVRGPRDAPNYYIACQAPLESTTSDFWRM 1195
            |...||||.:|:|..||||:|....::...:|||||::|| .|....|||.|.||..|..||||:
  Rat    55 GNSKKNRYKDVVPYDETRVILSLLQEEGHGDYINANFIRG-TDGSQAYIATQGPLPHTLLDFWRL 118

  Fly  1196 IWEQQSRVIIQATDLSENGIERCAEYL-----PPSATLDNHSSYGDYQVTLKHREVKDRYAISTL 1255
            :||...:||:.|...:|||..:|..|.     |..|        |.:.:||    .|:....:.:
  Rat   119 VWEFGVKVILMACQETENGRRKCERYWAQEREPLQA--------GPFCITL----TKETALTADI 171

  Fly  1256 VLKRVD---------GEESRELTHYWY-KWPEAGVPAEEAPIIAMLLEARSSLKSYSLEQANELR 1310
            .|:.:.         .:|||.:....| .||:.|||:....|:.|:.|||.              
  Rat   172 TLRTLQVTFQKVPKGQKESRPVHQLQYMSWPDHGVPSSSDHILTMVEEARC-------------- 222

  Fly  1311 EKSATLETSMDADGSKAEAGSTSSHEINGNISSRSGTRSQQGPLTVHCSPGTGRTGTIIASDMAI 1375
                                      :.|         ...|||.||||.|.||||.:.|.|. :
  Rat   223 --------------------------LQG---------LGPGPLCVHCSAGCGRTGVLCAVDY-V 251

  Fly  1376 RSL---ETPKRSVDIPQLVYYVRRGRASAVQTKEQYEFIY-KVASMYAAKITNLS 1426
            |.|   :|...:..:.::|..:|:.|.:||||:|||.|:| .||.:::..:.|.|
  Rat   252 RQLLLTQTIPPNFSLFEVVLEMRKQRPAAVQTEEQYRFLYHTVAQLFSRTLQNNS 306

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42327NP_001036706.2 PTPc 1134..1415 CDD:238006 91/299 (30%)
Y_phosphatase 1134..1415 CDD:278528 91/299 (30%)
Ptpn18XP_038939136.1 PTP_DSP_cys 27..298 CDD:421693 94/305 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0789
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.900

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