DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42327 and ptpn1

DIOPT Version :10

Sequence 1:NP_001036706.2 Gene:CG42327 / 41401 FlyBaseID:FBgn0259227 Length:1429 Species:Drosophila melanogaster
Sequence 2:NP_570999.2 Gene:ptpn1 / 30081 ZFINID:ZDB-GENE-980605-23 Length:433 Species:Danio rerio


Alignment Length:320 Identity:93/320 - (29%)
Similarity:144/320 - (45%) Gaps:64/320 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly  1109 SDVFEEFR----DVPQIIARADEVPPGCEDKNRYANVIPLPETRVVLQRQGDDDKTEYINANYVR 1169
            :||::|.|    |:|..||:.    |....:|||.:|.|...:|:.||...:|    ||||:.: 
Zfish    15 NDVYQEIRQQSSDLPCKIAKL----PENRSRNRYRDVSPFDHSRICLQIGCND----YINASLI- 70

  Fly  1170 GPRDAPNYYIACQAPLESTTSDFWRMIWEQQSRVIIQATDLSENGIERCAEYLPPSATLDNHSSY 1234
            ...:|...||..|.||.:|...||.|:|||:||.::....:.|.|..:||:|.|.....:.....
Zfish    71 SVEEAQRKYILTQGPLPNTCGHFWEMVWEQRSRGVVMLNRVIEKGSVKCAQYWPQREEREAVFED 135

  Fly  1235 GDYQVTLKHREVKDRYAISTLVLKRVDGEESRELTHYWY-KWPEAGVPAEEAPIIAMLLEARSSL 1298
            .::::||...:||..|.:..|.|:.:..:|:||:.|:.| .||:.|||...|..:..|.:.|   
Zfish   136 TNFRLTLISEDVKSYYTVRQLELENLSTQETREILHFHYTTWPDFGVPESPASFLNFLFKVR--- 197

  Fly  1299 KSYSLEQANELREKSATLETSMDADGSKAEAGSTSSHEINGNISSRSGTRSQQGPLTVHCSPGTG 1363
                                         |:|..|               .:.||:.||||.|.|
Zfish   198 -----------------------------ESGCLS---------------PELGPVVVHCSAGIG 218

  Fly  1364 RTGTIIASD--MAIRSLETPKRSVDIPQLVYYVRRGRASAVQTKEQYEFIYKVASMYAAK 1421
            |:||....|  :.:.|......||.|.:::..:||.|...:||.:|..|.| :|.:..||
Zfish   219 RSGTFCLVDTCLLLMSQRKDPSSVRIQEVLLEMRRYRMGLIQTADQLRFSY-LAFIEGAK 277

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42327NP_001036706.2 PTPc 1134..1415 CDD:214550 81/283 (29%)
ptpn1NP_570999.2 PTPc-N1 14..290 CDD:350456 93/320 (29%)

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