DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42327 and ptp-2

DIOPT Version :9

Sequence 1:NP_001036706.2 Gene:CG42327 / 41401 FlyBaseID:FBgn0259227 Length:1429 Species:Drosophila melanogaster
Sequence 2:NP_001293512.1 Gene:ptp-2 / 24104681 WormBaseID:WBGene00004214 Length:668 Species:Caenorhabditis elegans


Alignment Length:448 Identity:118/448 - (26%)
Similarity:187/448 - (41%) Gaps:141/448 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly  1053 LDAYSLDNVSVLGSVRRKGRDMRASKRTYGNAAFDDPSLRHNLLTASELARFVER---------- 1107
            :|:||.:.:...|         .||:..|    .::|...    |..|...||:|          
 Worm   208 IDSYSKNPIVEKG---------EASRVLY----LEEPLFN----TFIEADLFVDRFEIIRRPINP 255

  Fly  1108 -----RSDVFEEF-----RDVP--QIIARADEVPPGCEDKNRYANVIPLPETRVVLQRQGDDDKT 1160
                 ::.:.|||     ..:|  |.:::.:...|...:||||.|::|...|||:|..:.:...:
 Worm   256 RESMEKTGISEEFDRLSQEALPAEQYLSKREGRRPVNAEKNRYKNIVPFDHTRVILTDRPNTPGS 320

  Fly  1161 EYINANYVR--GPRDAPNYYIAC-------QAPLESTTSDFWRMIWEQQSRVIIQATDLSENGIE 1216
            :||||:|||  ..:...|...||       |..||:|.||||.|:|::.||||:..|..:|.. |
 Worm   321 DYINASYVRFENSQRTKNVTFACEKSFIATQGCLETTISDFWSMVWQENSRVIVMPTMENERK-E 384

  Fly  1217 RCAEYLPPSATLDNHSSYGDYQVTLK-----HREVKDR--------------------------- 1249
            :||.|.|  |.::....:||..:|..     .|.|.|.                           
 Worm   385 KCARYWP--AEVNKPEVHGDISLTCTIERKVQRAVSDEVKAELEQEKTNRIAKGLVPEAELNGDG 447

  Fly  1250 --YAISTLVLKRVDGEESRELTHYWY-KWPEAGVPAEEAPIIAMLLEARSSLKSYSLEQANELRE 1311
              |.:.|||:|:  |:::||:....| .||:.|.|.....::..|.:..   :.|....|..:  
 Worm   448 ISYILRTLVMKK--GKDTREIRQLQYLTWPDHGCPLHPYAVLNFLEDVD---REYDYFNAQPI-- 505

  Fly  1312 KSATLETSMDADGSKAEAGSTSSHEINGNISSRSGTRSQQGPLTVHCSPGTGRTGTIIASDMAIR 1376
             :|:|                                 .|||:.||||.|.|||||::..|..:.
 Worm   506 -AASL---------------------------------PQGPIVVHCSAGIGRTGTVLVLDALLN 536

  Fly  1377 SLE-----TPKRSVDIPQLVYYVRRGRASAVQTKEQYEFIYKVASMYAAKITNLSNDN 1429
            .::     .|   :|:.::|.|||..|:..|||::||:|:||..:.|      |.|:|
 Worm   537 QVKKVGLLCP---MDVYKMVKYVRTYRSGLVQTEQQYQFLYKALAFY------LKNNN 585

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42327NP_001036706.2 PTPc 1134..1415 CDD:238006 95/329 (29%)
Y_phosphatase 1134..1415 CDD:278528 95/329 (29%)
ptp-2NP_001293512.1 SH2_N-SH2_SHP_like 10..114 CDD:198203
SH2 132..217 CDD:214585 3/8 (38%)
PTPc 263..579 CDD:214550 101/362 (28%)
PTPc 294..578 CDD:238006 95/330 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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