DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG42327 and T22C1.8

DIOPT Version :9

Sequence 1:NP_001036706.2 Gene:CG42327 / 41401 FlyBaseID:FBgn0259227 Length:1429 Species:Drosophila melanogaster
Sequence 2:NP_492194.1 Gene:T22C1.8 / 172571 WormBaseID:WBGene00011918 Length:591 Species:Caenorhabditis elegans


Alignment Length:297 Identity:81/297 - (27%)
Similarity:125/297 - (42%) Gaps:71/297 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly  1135 KNRYANVIPLPETRVVLQRQGDDDKTEYINANYVRGPRDAPNYYIACQAPLESTTSDFWRMIWEQ 1199
            ||||.:|:....|||:|...||.|   ||:||||.| .:||  :|..|....:|..|||||:...
 Worm   154 KNRYKDVVCNDITRVILSDGGDGD---YIHANYVNG-LNAP--FILTQGATAATVIDFWRMVVHT 212

  Fly  1200 QSRVIIQATDLSENGIERCAEYLPPSATLDNHSSYGDYQVTLKHREVKDRYAIS-TLVLKRVDGE 1263
            ::..|:...::.|:|..:||:|.|..|  ....::|.:.:.....:.||...|. ||.::.||..
 Worm   213 KTAYIVMLCEVMEDGKAKCAQYYPEKA--GEAMTFGAWTILCSLEDDKDANIIKRTLSVRNVDNG 275

  Fly  1264 ESRELTHYWYK-WPEAGVPAEEAPIIAMLLEARSSLKSYSLEQANELREKSATLETSMDADGSKA 1327
            :...|.|...| ||:..||.....::.||...|::                              
 Worm   276 KEHILKHLHTKSWPDRCVPNSTMALLRMLYIVRTA------------------------------ 310

  Fly  1328 EAGSTSSHEINGNISSRSGTRSQQGPLTVHCSPGTGRTGTIIASDMAIRSLETPKRSVDIPQLVY 1392
                                   .||:|||||.|.|||||.:|.:..::.| |..:.:|:.....
 Worm   311 -----------------------SGPVTVHCSAGIGRTGTFVAIEACLQIL-TDGKELDLLGTCR 351

  Fly  1393 YVRRGRASAVQTKEQYEFIYKVASMYAAKITNLSNDN 1429
            .:|..||.::|...||..:.::       :.|...||
 Worm   352 ALRNSRAGSIQVDIQYMALVQI-------LINYGKDN 381

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42327NP_001036706.2 PTPc 1134..1415 CDD:238006 78/281 (28%)
Y_phosphatase 1134..1415 CDD:278528 78/281 (28%)
T22C1.8NP_492194.1 PTPc 130..376 CDD:214550 78/290 (27%)
PTPc 153..376 CDD:238006 78/290 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0789
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.