DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42327 and Ptpn12

DIOPT Version :9

Sequence 1:NP_001036706.2 Gene:CG42327 / 41401 FlyBaseID:FBgn0259227 Length:1429 Species:Drosophila melanogaster
Sequence 2:NP_476456.2 Gene:Ptpn12 / 117255 RGDID:620894 Length:766 Species:Rattus norvegicus


Alignment Length:309 Identity:90/309 - (29%)
Similarity:141/309 - (45%) Gaps:77/309 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly  1135 KNRYANVIPLPETRVVLQRQGDDDKTEYINANYVRGPRDAPNYYIACQAPLESTTSDFWRMIWEQ 1199
            ||||.:::|...:||.|..:.....::|||||:::|.. .|..|:|.|.||.:|..||||||||.
  Rat    61 KNRYKDILPFDHSRVKLTLKTPSQDSDYINANFIKGVY-GPRAYVATQGPLANTVIDFWRMIWEY 124

  Fly  1200 QSRVIIQATDLSENGIERCAEYLPPSATLDNHSSYGDYQVTLKHREVKDRYAISTLVLKRVDGEE 1264
            ...:|:.|....|.|.::|..|.|...  ::..::..::::.::.:.:..|.|.||:|:..:  |
  Rat   125 NVVIIVMACREFEMGRKKCERYWPLYG--EDPITFAPFKISCENEQARTDYFIRTLLLEFQN--E 185

  Fly  1265 SRELTHYWY-KWPEAGVPAEEAPIIAMLLEARSSLKSYSLEQANELREKSATLETSMDADGSKAE 1328
            ||.|..:.| .||:..||:....|:.|:    |.::.|                           
  Rat   186 SRRLYQFHYVNWPDHDVPSSFDSILDMI----SLMRKY--------------------------- 219

  Fly  1329 AGSTSSHEINGNISSRSGTRSQQGPLTVHCSPGTGRTGTIIASDMAIRSLETPKRSVDIPQ---- 1389
                ..||              ..|:.:|||.|.||||.|.|.|.....|:..|    ||:    
  Rat   220 ----QEHE--------------DVPICIHCSAGCGRTGAICAIDYTWNLLKAGK----IPEEFNV 262

  Fly  1390 --LVYYVRRGRASAVQTKEQYEFIYK-VASMY-----------AAKITN 1424
              |:..:|..|.||||||||||.::: :|.::           |.|||:
  Rat   263 FNLIQEMRTQRHSAVQTKEQYELVHRAIAQLFEKQLQLYEIHGAQKITD 311

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42327NP_001036706.2 PTPc 1134..1415 CDD:238006 85/287 (30%)
Y_phosphatase 1134..1415 CDD:278528 85/287 (30%)
Ptpn12NP_476456.2 PTPc 28..292 CDD:214550 85/288 (30%)
PTPc 60..292 CDD:238006 85/288 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0789
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.900

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