DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Elp1 and ABO1

DIOPT Version :9

Sequence 1:NP_001262478.1 Gene:Elp1 / 41399 FlyBaseID:FBgn0037926 Length:1256 Species:Drosophila melanogaster
Sequence 2:NP_196872.1 Gene:ABO1 / 831213 AraportID:AT5G13680 Length:1319 Species:Arabidopsis thaliana


Alignment Length:1368 Identity:333/1368 - (24%)
Similarity:578/1368 - (42%) Gaps:255/1368 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MRNLKLRYCKELNAVAHPQHLLL---QPELNGGASDI-----YFVVADNKIYAVQ------ESGD 51
            |:||||     .:.|  ||::.|   :..:...|.||     :|..:.|.:||:|      ||..
plant     1 MKNLKL-----FSEV--PQNIQLHSTEEVVQFAAYDIDQSRLFFASSANFVYALQLSSFQNESAG 58

  Fly    52 VRLKVIADLPD--------IVGVEFLQLDNAICVASGAGEVILVDPQTGATSEGTFCDVGIESMA 108
            .:..:..::..        |...::|....::.:.:..|.:::.:.::..|......:.|::.::
plant    59 AKSAMPVEVCSIDIEPGDFITAFDYLAEKESLLIGTSHGLLLVHNVESDVTELVGNIEGGVKCIS 123

  Fly   109 WSPNQEVVAFVTRTHNVVLMTSTFDVIAEQPLDAELDPDQQFVNVGWGKKETQFHGSEGKQAAKQ 173
            .:|..:::..:|....:::||..:.::.|:.|.                                
plant   124 PNPTGDLLGLITGLGQLLVMTYDWALMYEKALG-------------------------------- 156

  Fly   174 KESDSTFIRDEQELNQFTPQDVSISWRGDGEFFVVS---YVAAQLGRTFKVYDSE-GKLNHTAEK 234
            :..:..::|:..:|: .....:||||||||::|...   |.:..:.:..|:::|: |.|..::|.
plant   157 EVPEGGYVRETNDLS-VNCGGISISWRGDGKYFATMGEVYESGCMSKKIKIWESDSGALQSSSET 220

  Fly   235 SANLKDSVVWRPTGNWIAVPQQFPNKS-----TIALFEKNGLRHRELVL--PFDLQEEPVVQLRW 292
            ....:..:.|.|:|..||.  .:..||     :||.||:|||......:  |.|..|. ...|:|
plant   221 KEFTQGILEWMPSGAKIAA--VYKRKSDDSSPSIAFFERNGLERSSFRIGEPEDATES-CENLKW 282

  Fly   293 SEDSDILAIRTCAKEEQRVYLYTIGNYHWYLKQ----------VLIFEQADPLALLHWDTRCGAE 347
            :..||:||.....|....:.::...|.||||||          .::::...||.|:.| |..|..
plant   283 NSASDLLAGVVSCKTYDAIRVWFFSNNHWYLKQEIRYPREAGVTVMWDPTKPLQLICW-TLSGQV 346

  Fly   348 HTLHVLKESGKHLVYRWAFAVDRNNSIVGVIDGKRLLLTDFDEAIVPPPMSKIVLKFETYIN--A 410
            ...|          :.|..|| ..:|...|||..::|:|....:::||||....|.|.:.:.  |
plant   347 SVRH----------FMWVTAV-MEDSTAFVIDNSKILVTPLSLSLMPPPMYLFSLSFSSAVRDIA 400

  Fly   411 FISHGTS--LWVYTCDRKIYL------NEHIHTLGKELQKPIMLMPDAELSGLHLANLTHFSPHY 467
            :.|..:.  |.|:..|..:..      |......||:....|.....|..|.:||..|   ..|.
plant   401 YYSRNSKNCLAVFLSDGNLSFVEFPAPNTWEDLEGKDFSVEISDCKTALGSFVHLLWL---DVHS 462

  Fly   468 LLATHSSAGSTRLLLLSYKDNDNK-PGEWFYRVH------------------SSVRINGL----V 509
            ||.. |:.||:....||....|.: .|.:...|.                  :|:....|    |
plant   463 LLCV-SAYGSSHNKCLSSGGYDTELHGSYLQEVEVVCHEDHVPDQVTCSGFKASITFQTLLESPV 526

  Fly   510 NAVAVAPYAMNEFYVQTVNNGHTYEVSLKADKTL-KVERSYVQLHEPADQ-------IDWVIVKG 566
            .|:|..|...:..:|:           .:..|.| ...||.:.....:|.       ..||.|..
plant   527 LALAWNPSKRDSAFVE-----------FEGGKVLGYASRSEIMETRSSDDSVCFPSTCPWVRVAQ 580

  Fly   567 CIWDGYTGALVT-LRNQHLLHIDGYRIGEDVTSFC--------VVTNYLVYTQLNAMHFVQ---- 618
            ....|....|:. |.:...|.|:|..:..:.:||.        |||:.::.|:.:.:..|.    
plant   581 VDASGVHKPLICGLDDMGRLSINGKNLCNNCSSFSFYSELANEVVTHLIILTKQDFLFIVDTKDV 645

  Fly   619 -------------LDDRRQ----VASRNI-ERGAKIVTAV-ARKARVVLQLPRGNLEAICPRVLV 664
                         :|.||:    ::..|| |||||::..: ..:|.|:||..|||||.|.||.||
plant   646 LNGDVALGNVFFVIDGRRRDEENMSYVNIWERGAKVIGVLNGDEAAVILQTMRGNLECIYPRKLV 710

  Fly   665 LELVGDLLERGKYQKAIEMSRKQRINLNIIFD-HDVKRFVSSVGAFLNDINEPQWLCLFLSELQN 728
            |..:.:.|.:.:::.|..:.|:.||:.|:|.| :..:.|:.|..||:..:|....:..|:..::|
plant   711 LSSITNALAQQRFKDAFNLVRRHRIDFNVIVDLYGWQAFLQSAVAFVEQVNNLNHVTEFVCAMKN 775

  Fly   729 EDFTKGMYSSNYDASKQ-------TYPSDYRVDQKVEYVCRLLEQQMNRFVSRFRLPLITAYVKL 786
            ||.|:.:| ..:..||:       ......:|...::.:.:.||:.:....|| .|.::|...:.
plant   776 EDVTETLY-KKFSFSKKGDEVFRVKDSCSNKVSSVLQAIRKALEEHIPESPSR-ELCILTTLARS 838

  Fly   787 G--CLEMALQVIWKEQQEDASL-------------ADQLLQHLLYLVDVNDLYNVALGTYDFGLV 836
            .  .:|.:|..| |..:|...|             |::.|:|||:|:|...::..|||.||..|.
plant   839 DPPAIEESLLRI-KSVREMELLNSSDDIRKKSCPSAEEALKHLLWLLDSEAVFEAALGLYDLNLA 902

  Fly   837 LFVAQKSQKDPKEFLPYLNDLKALPIDYRKFRIDDHLKRYTSALSHLAACGEQHYEEALEYIRKH 901
            ..||..||:|||||||||.:|:.:|.....|:||..|:|:.|||.::.:.|..::.:.:..|:|:
plant   903 AIVALNSQRDPKEFLPYLQELEKMPESLMHFKIDIKLQRFDSALRNIVSAGVGYFPDCMNLIKKN 967

  Fly   902 -GLYTDGLAFYREHIEFQKNIYV--AYADHLRAIAKLDNASLMYERGGQLQQALLSAKHTLDWQR 963
             .|:..||....:.   :|.:.|  |:||||....:.::|:..|....:|::|..:.:...||..
plant   968 PQLFPLGLLLITDP---EKKLVVLEAWADHLIDEKRFEDAATTYLCCCKLEKASKAYRECGDWSG 1029

  Fly   964 VL---VLAKKLSEPLDQVAQSLVGPLQQQGRHMEAYELVKEHCQDRKRQFDVLLEGHLYSRAIYE 1025
            ||   .|.|...:.:.::|..|...:...|:..||.::..|:|.|......:|:....:..|:..
plant  1030 VLRVGALMKLGKDEILKLAYELCEEVNALGKPAEAAKIALEYCSDISGGISLLINAREWEEALRV 1094

  Fly  1026 AGLE--DDDVSEKIAPAL-LAYGVQLESSLQADLQLFLDYKQRLLDIRRN------QAKSGEGYI 1081
            |.|.  ||.:|...:.|| .|.|  |.|..:..::....|..|.|.:|:.      :.||.|..:
plant  1095 AFLHTADDRISVVKSSALECASG--LVSEFKESIEKVGKYLTRYLAVRQRRLLLAAKLKSEERSV 1157

  Fly  1082 DTDVNLKEVDLLSDTTSLHSSQYSGTSRRTGKTFR------SSKNRR------KHERKLFSLKPG 1134
                    |||..||.|..||..||.|..|..|.|      ||.|..      :.:||...::.|
plant  1158 --------VDLDDDTASEASSNLSGMSAYTLGTRRGSAASVSSSNATSRARDLRRQRKSGKIRAG 1214

  Fly  1135 NPFEDIALIDALHN-HVTKIAQQQQPVRDTCKALLQLANAADADPLAAALQREFKTLLQAVDAAL 1198
            :..|::||:|.|.. .:|...:::  ::.....|:.|.....|..|....:....:.:.||:.|.
plant  1215 SAGEEMALVDHLKGMRMTDGGKRE--LKSLLICLVTLGEMESAQKLQQTAENFQVSQVAAVELAH 1277

  Fly  1199 DEI 1201
            |.:
plant  1278 DTV 1280

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Elp1NP_001262478.1 IKI3 1..887 CDD:282600 248/1024 (24%)
COG5290 13..1207 CDD:227610 328/1356 (24%)
ABO1NP_196872.1 IKI3 1..953 CDD:282600 248/1024 (24%)
WD40 repeat 79..114 CDD:293791 3/34 (9%)
WD40 repeat 119..169 CDD:293791 7/81 (9%)
COG5290 159..1264 CDD:227610 299/1153 (26%)
WD40 repeat 177..219 CDD:293791 14/41 (34%)
WD40 repeat 226..266 CDD:293791 14/41 (34%)
WD40 repeat 277..319 CDD:293791 14/41 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 192 1.000 Domainoid score I932
eggNOG 1 0.900 - - E1_COG5290
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H2699
Inparanoid 1 1.050 240 1.000 Inparanoid score I1084
OMA 1 1.010 - - QHG55001
OrthoDB 1 1.010 - - D180136at2759
OrthoFinder 1 1.000 - - FOG0005043
OrthoInspector 1 1.000 - - oto3968
orthoMCL 1 0.900 - - OOG6_102646
Panther 1 1.100 - - LDO PTHR12747
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X3567
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1413.840

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