DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Csk and PERK13

DIOPT Version :9

Sequence 1:NP_001262476.1 Gene:Csk / 41398 FlyBaseID:FBgn0262081 Length:1052 Species:Drosophila melanogaster
Sequence 2:NP_177203.1 Gene:PERK13 / 843382 AraportID:AT1G70460 Length:710 Species:Arabidopsis thaliana


Alignment Length:667 Identity:139/667 - (20%)
Similarity:227/667 - (34%) Gaps:197/667 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   382 PPTAPLRHNKRPAPQPNAVLGAGSSGTAPGSAVGAVLLHQQQLSQSQPHIVPPSI---PPHHHHH 443
            ||..||  :..|.|.|:  |....|...|..|...:           |.:.||.|   ||    .
plant    68 PPPPPL--DSSPPPPPD--LTPPPSSPPPPDAPPPI-----------PIVFPPPIDSPPP----E 113

  Fly   444 RENNVHPIQAGAAAALHLSSHALNSHNLISSASNHSPKSPSQTQQ-QQQTTNQQQQQQQQQASHS 507
            ..|:..|.:......             ..:..:.||.:|...:| ....::.|...::.:..|.
plant   114 STNSPPPPEVFEPPP-------------PPADEDESPPAPPPPEQLPPPASSPQGGPKKPKKHHP 165

  Fly   508 ILSTFAPAPTVAAVQPAGSQSVAGTAAAVAAVAQQQQQQHLQLLANCPPGGAGLMSSSLNAAQMG 572
            ..:|..|||:..|..|...                         .|.||                
plant   166 GPATSPPAPSAPATSPPAP-------------------------PNAPP---------------- 189

  Fly   573 MHGAERALPPKSLALSGSQHGSNMLLHTAPQPPQASQPAAVVGVSGSGSAGMSTSLHSFDINGVT 637
             ..:..||||||.|..|..        |:|.....|...:|...:.||......::..|.|    
plant   190 -RNSSHALPPKSTAAGGPL--------TSPSRGVPSSGNSVPPPANSGGGYQGKTMAGFAI---- 241

  Fly   638 AGSGVNASSAWSSGSTTAMNHASLSPTALAPQQGRSRCEVKLNAMPWFHGSITRDEAEHLLQP-- 700
            ||..|.|                |.......::.:.|             :|........|.|  
plant   242 AGFAVIA----------------LMAVVFLVRRKKKR-------------NIDAYSDSQYLPPSN 277

  Fly   701 ---REDGLFLVREST---NFPGDYTLCVCFQSKVEHYRVKYLENKLTIDDEEYFENLGQLVAHYE 759
               :.||....:..|   :.||.|                         :.:...|.|.......
plant   278 FSIKSDGFLYGQNPTKGYSGPGGY-------------------------NSQQQSNSGNSFGSQR 317

  Fly   760 ADA----DGLCTQLIKCLPKLGKQEFCINSKDFVDKGWVIPEAELQLRESIGKGEFGDVMLGILR 820
            ...    .|....  ..:...|:..|.......:.:|:       .....:|:|.||.|..|.|.
plant   318 GGGGYTRSGSAPD--SAVMGSGQTHFTYEELTDITEGF-------SKHNILGEGGFGCVYKGKLN 373

  Fly   821 NEK-VAVKMLKDEGAVQ---KFLAEASVMTTLEHDNLVKFIGLVFTSKHLYLVTEYMSKGSLVDY 881
            :.| ||||.|| .|:.|   :|.||..:::.:.|.:||..:|.........|:.||:...:|..:
plant   374 DGKLVAVKQLK-VGSGQGDREFKAEVEIISRVHHRHLVSLVGYCIADSERLLIYEYVPNQTLEHH 437

  Fly   882 LRSRGRQHITKKDQIIFAYDTASGMEYLEA---KKVVHRDLAARNVLISEDCVAKVSDFGLAREE 943
            |..:||..:....::..|..:|.|:.||..   .|::|||:.:.|:|:.::..|:|:|||||:..
plant   438 LHGKGRPVLEWARRVRIAIGSAKGLAYLHEDCHPKIIHRDIKSANILLDDEFEAQVADFGLAKLN 502

  Fly   944 CYNLDVGKLPIK--------WTAPEALKNGRFSNKSDMWSFGILLWEIYSFGRVPYPRI-PLAD- 998
                |..:..:.        :.|||..::|:.:::||::|||::|.|:.: ||.|..:. ||.: 
plant   503 ----DSTQTHVSTRVMGTFGYLAPEYAQSGKLTDRSDVFSFGVVLLELIT-GRKPVDQYQPLGEE 562

  Fly   999 ---------VVKHVEVG 1006
                     :.|.:|.|
plant   563 SLVEWARPLLHKAIETG 579

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CskNP_001262476.1 SH2_csk_like 680..777 CDD:198190 12/108 (11%)
PTKc_Csk_like 793..1047 CDD:270635 68/240 (28%)
STYKc 800..1044 CDD:214568 68/233 (29%)
PERK13NP_177203.1 STKc_IRAK 359..627 CDD:270968 68/227 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 128 1.000 Inparanoid score I1899
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.050

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