DRSC/TRiP Functional Genomics Resources

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Protein Alignment Csk and AT1G49730

DIOPT Version :9

Sequence 1:NP_001262476.1 Gene:Csk / 41398 FlyBaseID:FBgn0262081 Length:1052 Species:Drosophila melanogaster
Sequence 2:NP_849788.2 Gene:AT1G49730 / 841396 AraportID:AT1G49730 Length:693 Species:Arabidopsis thaliana


Alignment Length:278 Identity:82/278 - (29%)
Similarity:129/278 - (46%) Gaps:48/278 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   806 IGKGEFGDVMLGILRNEKVAV--KMLK-DEGAVQKFLAEASVMTTLEHDNLVKFIGLVFTSKHLY 867
            ||:|.||.|......:..:|.  ||.| .|.|.|.|..|..::..|.|.|||...|.....|..:
plant   363 IGQGGFGTVYKAEFNDGLIAAVKKMNKVSEQAEQDFCREIGLLAKLHHRNLVALKGFCINKKERF 427

  Fly   868 LVTEYMSKGSLVDYLRSRGRQHITKKDQIIFAYDTASGMEYLE---AKKVVHRDLAARNVLISED 929
            ||.:||..|||.|:|.:.|:...:...::..|.|.|:.:|||.   ...:.|||:.:.|:|:.|:
plant   428 LVYDYMKNGSLKDHLHAIGKPPPSWGTRMKIAIDVANALEYLHFYCDPPLCHRDIKSSNILLDEN 492

  Fly   930 CVAKVSDFGLAREE-----CY---NLDVGKLPIKWTAPEALKNGRFSNKSDMWSFGILLWEIYSF 986
            .|||:||||||...     |:   |.|:...| .:..||.:.....:.|||::|:|::|.|:.: 
plant   493 FVAKLSDFGLAHSSRDGSVCFEPVNTDIRGTP-GYVDPEYVVTQELTEKSDVYSYGVVLLELIT- 555

  Fly   987 GR---------VPYPRIPLADVVKHVEV-------------GYKMEAPEGCPPEIYEMMRQAWDL 1029
            ||         |...:..|....||:|:             |.:::|       :..::|...:.
plant   556 GRRAVDEGRNLVEMSQRFLLAKSKHLELVDPRIKDSINDAGGKQLDA-------VVTVVRLCTEK 613

  Fly  1030 NPAKRPTFAELKVKLQLL 1047
            ....||:   :|..|:||
plant   614 EGRSRPS---IKQVLRLL 628

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CskNP_001262476.1 SH2_csk_like 680..777 CDD:198190
PTKc_Csk_like 793..1047 CDD:270635 80/276 (29%)
STYKc 800..1044 CDD:214568 79/273 (29%)
AT1G49730NP_849788.2 S_TKc 362..626 CDD:214567 79/274 (29%)
STKc_IRAK 363..630 CDD:270968 82/278 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 128 1.000 Inparanoid score I1899
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.050

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