DRSC/TRiP Functional Genomics Resources

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Protein Alignment Csk and AT5G56890

DIOPT Version :9

Sequence 1:NP_001262476.1 Gene:Csk / 41398 FlyBaseID:FBgn0262081 Length:1052 Species:Drosophila melanogaster
Sequence 2:NP_680446.1 Gene:AT5G56890 / 835791 AraportID:AT5G56890 Length:1113 Species:Arabidopsis thaliana


Alignment Length:1226 Identity:243/1226 - (19%)
Similarity:378/1226 - (30%) Gaps:454/1226 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 SSSLERVLKPASASAS------------PSNS--NNESDNSQTSSGSQ------TASSASKRSNR 78
            |||...:|.|.|:..|            ||||  :::|||...|..|.      .|..|:...:.
plant    21 SSSGSELLSPLSSPPSPLPETSKGFGQAPSNSPESHKSDNVPPSKASSQPSLPPLADLAAPPPSD 85

  Fly    79 SVGRSHRGSIAQDTRRRYYFGSKDIYWCKQSREAAAAATLSGSGLTRSASSVTHKEASTHATHTG 143
            |||......:             .:.:..   .|.|.||:....|..::..|.            
plant    86 SVGGKAPAGV-------------PVVFVP---NAPAPATIPVKDLPVASPPVL------------ 122

  Fly   144 GQVISRARRKPILLCSSLSAAYAPPR------RREFYFCDKYAPGPARS---------------- 186
                     :||...:|      |||      .:|..|..:..|.|..|                
plant   123 ---------QPITPIAS------PPRFIPGDAPKEPPFSGRVTPAPVSSPVSDIPPIPSVALPPP 172

  Fly   187 TPTTTTTSATSAKHESSPPIDARL----------LNFLRCAH---RKFQASKAKTELQQTKDRFL 238
            ||:.......|..|: .|||:..:          ::.....|   .|...|              
plant   173 TPSNVPPRNASNNHK-PPPIEKSIAPVASPPTISIDIAPPVHPVIPKLTPS-------------- 222

  Fly   239 GNSRERTSKNGQQTSRSLPPIASSEEWFDEEAQARKTSHEKSQKPKPKPEENHKEKEAISRKASG 303
             :|...||...:.:.|..||  ::...|..|:.|....|..:....|.|.:|..:.     |:.|
plant   223 -SSPVPTSTPTKGSPRRNPP--TTHPVFPIESPAVSPDHAANPVKHPPPSDNGDDS-----KSPG 279

  Fly   304 EGDLITVEIKQGLLRKQTATTTTGQAMNSHATATQNGQTTVVGHHRGFSQPSVTVAAAAATGSTA 368
            .                             |.|.:..:...|..|:. |.||:..:|        
plant   280 A-----------------------------APANETAKPLPVFPHKA-SPPSIAPSA-------- 306

  Fly   369 GDPWFLQTTGHQMPPTAPLRHNKRPAPQPNAVLGAGSSGTAPGSAVGAVLLHQQQLSQSQPHIVP 433
              |.|.:.:.|..|.|.|     .|...|:.|                   |....|.|     |
plant   307 --PKFNRHSHHTSPSTTP-----PPDSTPSNV-------------------HHHPSSPS-----P 340

  Fly   434 PSIPPHHHHHRENNVHPIQAGAAAALHLSSHALN---------------SH---------NLISS 474
            |.:..||.||:|...   .|.:.|...|..|.::               ||         :|||.
plant   341 PPLSSHHQHHQERKK---IADSPAPSPLPPHLISPKKSNRKGSMTPPPQSHHAPSPPIPDSLISP 402

  Fly   475 ASNHSPKS-----------PSQTQQQQQTTNQQQQQQQQQASHSILSTFAPAPTVAAVQPAGSQS 528
            |  |:|.|           ||.||.....::.:..:.::         |...|.:.|..|....|
plant   403 A--HAPVSFSMKRISPALAPSPTQVFPLRSSSRPSKSRK---------FPLGPPLQAFPPPPPNS 456

  Fly   529 VAGTAAAVAAVAQQQQQQHLQLLANCPPG---------------------------------GAG 560
            ...:...            |:...|.|||                                 .||
plant   457 DCSSTIC------------LEPYTNTPPGSPCGCVWPIQVELRLSMALYDFFPMVSEFAREISAG 509

  Fly   561 LMSSSLNAAQMGMHGAERALPPKSLALSGSQHGSNMLLHTAPQPPQASQPAAVVGVSGSGSAGM- 624
            :.........||.:.|... |.||:          :|:...|...:.....|::......|..: 
plant   510 VFMKQSQVRIMGANAASEQ-PEKSI----------VLIDLVPLGDKFDNMTAMLTYQRFWSKKVY 563

  Fly   625 --STSLHSFDI-----NGVTAGSGVNASSAWSSGSTTAMNHA-SLSPTAL-APQQGRSRCEVKLN 680
              ......:|:     .|:.|....:..:....|..:..|:. ::.|..: .|::.|.:   :||
plant   564 IDEPIFGGYDVIYVRYPGLPASPPTSGMTIIDQGPYSGNNNGRAVKPLGVDVPRKPRKK---ELN 625

  Fly   681 AMPWFHGSITRDEAEHLLQPREDGLFLVRESTNFPGDYTLCVCFQSKVEHYRVKYLENKLTIDDE 745
            .     |||.               .:|..:..|.|   ||                        
plant   626 G-----GSIA---------------VIVLSAAAFIG---LC------------------------ 643

  Fly   746 EYFENLGQLVAHYEADADGLC--TQLIK-CLPKLGKQE------------------------FCI 783
              |..:..||...:.|...|.  |.|.: .||.|.|..                        |.:
plant   644 --FVIVWFLVFRRQRDRRRLSKRTPLARPSLPSLSKPSGSARSLTGSRFSSTSLSFESSIAPFTL 706

  Fly   784 NSKDFVDKGWVIPEAELQLRES--IGKGEFGDVMLGILRN-EKVAVKMLK--DEGAVQKFLAEAS 843
            ::|.|...  .|.:|.....||  :|:|.||.|..|:..: .|||||:||  |:...::||||..
plant   707 SAKTFTAS--EIMKATNNFDESRVLGEGGFGRVYEGVFDDGTKVAVKVLKRDDQQGSREFLAEVE 769

  Fly   844 VMTTLEHDNLVKFIGLVFTSKHLYLVTEYMSKGSLVDYLR--SRGRQHITKKDQIIFAYDTASGM 906
            :::.|.|.|||..||:....::..||.|.:..||:..:|.  .:....:....::..|...|.|:
plant   770 MLSRLHHRNLVNLIGICIEDRNRSLVYELIPNGSVESHLHGIDKASSPLDWDARLKIALGAARGL 834

  Fly   907 EYL---EAKKVVHRDLAARNVLISEDCVAKVSDFGLAREECYNLDVGKLPIK------WTAPEAL 962
            .||   .:.:|:|||..:.|:|:..|...|||||||||....:.|...:..:      :.|||..
plant   835 AYLHEDSSPRVIHRDFKSSNILLENDFTPKVSDFGLARNALDDEDNRHISTRVMGTFGYVAPEYA 899

  Fly   963 KNGRFSNKSDMWSFGILLWEIYSFGRVPY----------------------------------PR 993
            ..|....|||::|:|::|.|:.: ||.|.                                  |.
plant   900 MTGHLLVKSDVYSYGVVLLELLT-GRKPVDMSQPPGQENLVSWTRPFLTSAEGLAAIIDQSLGPE 963

  Fly   994 IPLADVVKHVEVGYKMEAPEGCPPEIYEMMRQAWDLNPAKRPTFAELKVKLQLLNN 1049
            |....:.|...:......||                 .:.||...|:...|:|::|
plant   964 ISFDSIAKVAAIASMCVQPE-----------------VSHRPFMGEVVQALKLVSN 1002

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CskNP_001262476.1 SH2_csk_like 680..777 CDD:198190 18/99 (18%)
PTKc_Csk_like 793..1047 CDD:270635 80/303 (26%)
STYKc 800..1044 CDD:214568 77/293 (26%)
AT5G56890NP_680446.1 PHA03247 <46..425 CDD:223021 99/518 (19%)
STKc_IRAK 729..998 CDD:270968 75/286 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 128 1.000 Inparanoid score I1899
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.050

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