DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment Csk and AT5G45780

DIOPT Version :9

Sequence 1:	NP_001262476.1	Gene:	Csk / 41398	FlyBaseID:	FBgn0262081	Length:	1052	Species:	Drosophila melanogaster
Sequence 2:	NP_199390.2	Gene:	AT5G45780 / 834618	AraportID:	AT5G45780	Length:	614	Species:	Arabidopsis thaliana

Alignment Length:	251	Identity:	80/251 - (31%)
Similarity:	117/251 - (46%)	Gaps:	42/251 - (16%)

- Green bases have known domain annotations that are detailed below.

  Fly   806 IGKGEFGDVMLGILRN-EKVAVKMLKD---EGAVQKFLAEASVMTTLEHDNLVKFIGLVFTSKHL 866
            :|:|.||.|..|.|.| ..||||.|||   .|.|| |..|..::....|.||::..|...|.:..
plant   306 LGQGGFGMVYKGYLPNGTVVAVKRLKDPIYTGEVQ-FQTEVEMIGLAVHRNLLRLFGFCMTPEER 369

  Fly   867 YLVTEYMSKGSLVDYLRSR--GRQHITKKDQIIFAYDTASGMEYLEAK---KVVHRDLAARNVLI 926
            .||..||..||:.|.||..  .:..:....:|..|...|.|:.||..:   |::|||:.|.|:|:
plant   370 MLVYPYMPNGSVADRLRDNYGEKPSLDWNRRISIALGAARGLVYLHEQCNPKIIHRDVKAANILL 434

  Fly   927 SEDCVAKVSDFGLAR----EECYNLDVGKLPIKWTAPEALKNGRFSNKSDMWSFGILLWEIYSFG 987
            .|...|.|.|||||:    .:.:.....:..|...|||.|..|:.|.|:|::.||:|:.|:.:
plant   435 DESFEAIVGDFGLAKLLDQRDSHVTTAVRGTIGHIAPEYLSTGQSSEKTDVFGFGVLILELIT-- 497

  Fly   988 RVPYPRIPLADVVKHVEVGYKM-EAPEGCPPEIYEMMRQAW--DLNPAKRPTFAEL 1040
                              |:|| :...|   ::.:.|..:|  .|...||  |||:
plant   498 ------------------GHKMIDQGNG---QVRKGMILSWVRTLKAEKR--FAEM 530

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Csk	NP_001262476.1	SH2_csk_like	680..777	CDD:198190
		PTKc_Csk_like	793..1047	CDD:270635	80/251 (32%)
		STYKc	800..1044	CDD:214568	80/251 (32%)
AT5G45780	NP_199390.2	PLN00113	39..>192	CDD:215061
		leucine-rich repeat	129..152	CDD:275380
		leucine-rich repeat	153..176	CDD:275380
		PKc_like	306..574	CDD:419665	80/251 (32%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	0	0.000