DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Csk and AT5G11850

DIOPT Version :10

Sequence 1:NP_731611.2 Gene:Csk / 41398 FlyBaseID:FBgn0262081 Length:1052 Species:Drosophila melanogaster
Sequence 2:NP_196746.2 Gene:AT5G11850 / 831058 AraportID:AT5G11850 Length:880 Species:Arabidopsis thaliana


Alignment Length:598 Identity:149/598 - (24%)
Similarity:246/598 - (41%) Gaps:118/598 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   525 GSQSVAGTAAAVAAVAQQQQQQHLQLLANCPPGGAGLMSSSLNAAQMGMHGAERALPPKSLALSG 589
            ||........||..:....:.:::..|...|  || |:.|.:.::.:.:...:..:.|::  |..
plant   310 GSYYTGTDDGAVNLIKLDDKSEYIIDLMGAP--GA-LIPSEVPSSFLPVSCTDTRVFPEN--LDS 369

  Fly   590 SQHGSNMLLHTAPQPPQASQPAAVVGVSGSGSAGMSTSLHSFDINGVTAGSGVNAS-SAWSSGST 653
            .||.|.:|      ..:...||..|.......:||..       |..|.....|:. .|.....|
plant   370 LQHSSPVL------EKEIETPAFSVSKEADSRSGMVA-------NFFTGNQEENSDRCAVEKHQT 421

  Fly   654 TAMNH--------ASLSPTALAPQQGRSRCEVKLNAM------------PWF----HGSITRDEA 694
            ....|        ..:|...:.|..|:..|..|:...            |.|    |..:....|
plant   422 ERFEHDFGKLMHSQQISGENMPPFSGKPTCAQKVKVKNVSKYVISAAKNPEFAQKLHAVLLESGA 486

  Fly   695 -----------------EHLLQPREDGLFLVRESTN-----FPGDYTLCVCFQSKV-EHYRVKYL 736
                             ::|||.      |.:||:|     .|       |:..|| |..|    
plant   487 SPPPDLFMDINPHNLRGKNLLQE------LRQESSNSMVSGIP-------CYPEKVAEQLR---- 534

  Fly   737 ENKLTIDDEEYFENLG---QLVAHYEADADGLC--TQLIKCLPKLGKQEFCINSKDFVDKG---- 792
            |::.....|.|.:::.   .:..:::.|..|..  ::.::.....|:...|    |..|:|    
plant   535 ESERNPTAESYQQSVEVDLSMKRNFDLDNTGKASSSENMEVGTADGESAVC----DSHDQGINPL 595

  Fly   793 ------WVIPEAELQLRESIGKGEFGDVMLGILRNEKVAVKMLKDE----GAVQKFLAEASVMTT 847
                  |.|...:||:.|.||.|.:|:|........:||||...|:    .|:.:|.:|..:|..
plant   596 LGEAAKWEIMWEDLQIGERIGIGSYGEVYRAEWNGTEVAVKKFLDQDFSGDALTQFKSEIEIMLR 660

  Fly   848 LEHDNLVKFIGLVFTSKHLYLVTEYMSKGSLVDYLRSRGRQHITKKDQIIFAYDTASGMEYLEAK 912
            |.|.|:|.|:|.|....:..::||::.:|||...|. |....:.:|.::..|.|.|.||.||...
plant   661 LRHPNVVLFMGAVTRPPNFSILTEFLPRGSLYRLLH-RPNHQLDEKRRMRMALDVAKGMNYLHTS 724

  Fly   913 --KVVHRDLAARNVLISEDCVAKVSDFGLAREECYNLDVGKLPI---KWTAPEALKNGRFSNKSD 972
              .||||||.:.|:|:.::.|.||.||||:|.:.:.....|...   :|.|||.|:|...:.|.|
plant   725 HPTVVHRDLKSPNLLVDKNWVVKVCDFGLSRMKHHTYLSSKSTAGTPEWMAPEVLRNEPANEKCD 789

  Fly   973 MWSFGILLWEIYSFGRVPYPRIPLADVVKHVEVGY---KMEAPEGCPPEIYEMMRQAWDLNPAKR 1034
            ::|||::|||: :..|||:..:....||.  .||:   ::|.|:.....:.:::|:.|...|..|
plant   790 VYSFGVILWEL-ATSRVPWKGLNPMQVVG--AVGFQNRRLEIPDDIDLTVAQIIRECWQTEPHLR 851

  Fly  1035 PTFAELKVKLQLL 1047
            |:|.:|...|:.|
plant   852 PSFTQLMQSLKRL 864

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CskNP_731611.2 SH2_csk_like 680..777 CDD:198190 22/140 (16%)
PTKc_Csk_like 793..1047 CDD:270635 89/265 (34%)
AT5G11850NP_196746.2 EDR1 140..343 CDD:433922 8/35 (23%)
STKc_MAP3K-like 615..861 CDD:270901 83/249 (33%)

Return to query results.
Submit another query.