DRSC/TRiP Functional Genomics Resources

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Protein Alignment Csk and CRK23

DIOPT Version :9

Sequence 1:NP_001262476.1 Gene:Csk / 41398 FlyBaseID:FBgn0262081 Length:1052 Species:Drosophila melanogaster
Sequence 2:NP_194062.1 Gene:CRK23 / 828430 AraportID:AT4G23310 Length:830 Species:Arabidopsis thaliana


Alignment Length:211 Identity:68/211 - (32%)
Similarity:100/211 - (47%) Gaps:50/211 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   806 IGKGEFGDVMLGIL-RNEKVAVKML-KDEG-AVQKFLAEASVMTTLEHDNLVKFIGLVFTSKHLY 867
            :|:|.||:|..|.. ...:||||.| |..| ..::|..|..|:..|:|.|||:.:|.....:...
plant   514 LGQGGFGEVYKGTFPSGVQVAVKRLSKTSGQGEREFENEVVVVAKLQHRNLVRLLGYCLEGEEKI 578

  Fly   868 LVTEYMSKGSLVDYLRSRGRQHITKKDQIIFAYDT------------------ASGMEYLEAKK- 913
            ||.|::...|| ||                |.:||                  |.|:.||.... 
plant   579 LVYEFVHNKSL-DY----------------FLFDTTMKRQLDWTRRYKIIGGIARGILYLHQDSR 626

  Fly   914 --VVHRDLAARNVLISEDCVAKVSDFGLAREECYNLDVGKLPIK-------WTAPEALKNGRFSN 969
              ::||||.|.|:|:..|...||:|||:||  .:.:|..:...:       :.|||....|:||.
plant   627 LTIIHRDLKAGNILLDADMNPKVADFGMAR--IFGMDQTEANTRRVVGTYGYMAPEYAMYGQFSM 689

  Fly   970 KSDMWSFGILLWEIYS 985
            |||::|||:|::||.|
plant   690 KSDVYSFGVLVFEIIS 705

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CskNP_001262476.1 SH2_csk_like 680..777 CDD:198190
PTKc_Csk_like 793..1047 CDD:270635 68/211 (32%)
STYKc 800..1044 CDD:214568 68/211 (32%)
CRK23NP_194062.1 Stress-antifung 33..129 CDD:279926
Stress-antifung 145..240 CDD:279926
Stress-antifung 258..350 CDD:279926
TyrKc 511..780 CDD:197581 68/211 (32%)
STKc_IRAK 514..781 CDD:270968 68/211 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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