DRSC/TRiP Functional Genomics Resources

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Protein Alignment Csk and AT4G01330

DIOPT Version :9

Sequence 1:NP_001262476.1 Gene:Csk / 41398 FlyBaseID:FBgn0262081 Length:1052 Species:Drosophila melanogaster
Sequence 2:NP_001190651.1 Gene:AT4G01330 / 828117 AraportID:AT4G01330 Length:480 Species:Arabidopsis thaliana


Alignment Length:370 Identity:101/370 - (27%)
Similarity:151/370 - (40%) Gaps:101/370 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   727 KVEHY-----RVKYLENKLTIDDEEYFEN---LGQLVAH-----------YEADADGLCTQLIKC 772
            |.||.     ||...|::.|:.:...:..   :|..|:|           .||..:|||.:.:  
plant   105 KTEHRVVFSDRVSSGESRGTVSETASYSGSGCVGPEVSHLGWGRWYTLRELEAATNGLCEENV-- 167

  Fly   773 LPKLGKQEFCINSKDFVDKGWVIPEAELQLRESIGKGEFGDVMLGILRN-EKVAVK-MLKDEGAV 835
                                             ||:|.:|.|..|||.: .||||| :|.:.|..
plant   168 ---------------------------------IGEGGYGIVYSGILTDGTKVAVKNLLNNRGQA 199

  Fly   836 QK-FLAEASVMTTLEHDNLVKFIGLVFTSKHLYLVTEYMSKGSLVDYLRSRGRQHITKKDQIIFA 899
            :| |..|...:..:.|.|||:.:|......:..||.:|:..|:|..::      |....|:....
plant   200 EKEFRVEVEAIGRVRHKNLVRLLGYCVEGAYRMLVYDYVDNGNLEQWI------HGDVGDKSPLT 258

  Fly   900 YD--------TASGMEYLE---AKKVVHRDLAARNVLISEDCVAKVSDFGLAR----EECYNLDV 949
            :|        .|.|:.||.   ..||||||:.:.|:|:.....|||||||||:    |..|....
plant   259 WDIRMNIILCMAKGLAYLHEGLEPKVVHRDIKSSNILLDRQWNAKVSDFGLAKLLFSESSYVTTR 323

  Fly   950 GKLPIKWTAPEALKNGRFSNKSDMWSFGILLWEIYSFGRVP--YPR----IPLADVVKHVEVGYK 1008
            ......:.|||....|..:.|||::|||||:.||.: ||.|  |.|    :.|.:.:|.: ||.:
plant   324 VMGTFGYVAPEYACTGMLTEKSDIYSFGILIMEIIT-GRNPVDYSRPQGEVNLVEWLKTM-VGNR 386

  Fly  1009 M-------EAPEGCPPEIYEMMR------QAWDLNPAKRPTFAEL 1040
            .       :.||  ||....:.|      :..|.:..|||....:
plant   387 RSEEVVDPKIPE--PPTSKALKRVLLVALRCVDPDANKRPKMGHI 429

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CskNP_001262476.1 SH2_csk_like 680..777 CDD:198190 15/68 (22%)
PTKc_Csk_like 793..1047 CDD:270635 86/285 (30%)
STYKc 800..1044 CDD:214568 86/278 (31%)
AT4G01330NP_001190651.1 STYKc 162..433 CDD:214568 88/313 (28%)
STKc_IRAK 168..434 CDD:270968 86/272 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 128 1.000 Inparanoid score I1899
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.050

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