DRSC/TRiP Functional Genomics Resources

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Protein Alignment Csk and AT3G19300

DIOPT Version :9

Sequence 1:NP_001262476.1 Gene:Csk / 41398 FlyBaseID:FBgn0262081 Length:1052 Species:Drosophila melanogaster
Sequence 2:NP_566630.1 Gene:AT3G19300 / 821464 AraportID:AT3G19300 Length:663 Species:Arabidopsis thaliana


Alignment Length:541 Identity:132/541 - (24%)
Similarity:193/541 - (35%) Gaps:145/541 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   580 LPPKSLALSGSQHGSNMLLHTAPQPP----------QASQPAAVVGVSGSGSAGMSTSLHSFDIN 634
            :||...:.|......|..|   |.||          ..|...::||  ...|..:||..   |..
plant   126 VPPMLHSTSFGDVSRNCKL---PLPPGDQCRNCLNSSISYLRSLVG--ADNSIKLSTCR---DAT 182

  Fly   635 GVTAGSGVNASSAWSSGSTTAMNHASLSPTALAPQQGRSRCEVKLNAMPWFHGSITRDEAEHLLQ 699
            .....|.|:.|||....| ...|...||||     .|.|...:...|.|    .:..|      .
plant   183 YAVLASRVDNSSALELAS-CFFNVPELSPT-----PGSSPSSLSPEASP----PVLAD------S 231

  Fly   700 PREDGLFLVRESTNFPGDYT-------------------LCVCFQSKVEHYRVKYLENKLTIDDE 745
            |..|.|.|....::.|...|                   |.|..|.|           |..:||.
plant   232 PSSDNLVLSPLKSHHPYHLTMVPTIGIAVTVFALVMVVVLIVLIQRK-----------KRELDDS 285

  Fly   746 EYFENLGQLVAHYEADADGLCTQLIKCLP------------KLGKQEFCINSKDFVDKGWVIPEA 798
            :                 .:...|.:..|            ..|.::|....         |.:|
plant   286 K-----------------SIACNLTRTSPSPRPRSMIHEGNSFGFRKFSYKE---------IRKA 324

  Fly   799 ELQLRESIGKGEFGDVMLGILRNEKVAV--KMLK-DEGAVQKFLAEASVMTTLEHDNLVKFIGLV 860
            .......||:|.||.|......|..||.  ||.| .|.|..:|..|..::..|.|.:||...|..
plant   325 TEDFNAVIGRGGFGTVYKAEFSNGLVAAVKKMNKSSEQAEDEFCREIELLARLHHRHLVALKGFC 389

  Fly   861 FTSKHLYLVTEYMSKGSLVDYLRSRGRQHITKKDQIIFAYDTASGMEYLE---AKKVVHRDLAAR 922
            ......:||.|||..|||.|:|.|..:..::.:.::..|.|.|:.:|||.   ...:.|||:.:.
plant   390 NKKNERFLVYEYMENGSLKDHLHSTEKSPLSWESRMKIAIDVANALEYLHFYCDPPLCHRDIKSS 454

  Fly   923 NVLISEDCVAKVSDFGLAREE-----CY---NLDVGKLPIKWTAPEALKNGRFSNKSDMWSFGIL 979
            |:|:.|..|||::|||||...     |:   |.|:...| .:..||.:.....:.|||::|:|::
plant   455 NILLDEHFVAKLADFGLAHASRDGSICFEPVNTDIRGTP-GYVDPEYVVTHELTEKSDVYSYGVV 518

  Fly   980 LWEIYSFGR----------VPYP-------RIPLADV-VKHVEVGYKMEAPEGCPPEIYEMMRQA 1026
            |.||.:..|          :..|       ||.|.|. :|....|.::|.       :..::|..
plant   519 LLEIITGKRAVDEGRNLVELSQPLLVSESRRIDLVDPRIKDCIDGEQLET-------VVAVVRWC 576

  Fly  1027 WDLNPAKRPTFAELKVKLQLL 1047
            .:.....||:   :|..|:||
plant   577 TEKEGVARPS---IKQVLRLL 594

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CskNP_001262476.1 SH2_csk_like 680..777 CDD:198190 18/127 (14%)
PTKc_Csk_like 793..1047 CDD:270635 82/285 (29%)
STYKc 800..1044 CDD:214568 79/275 (29%)
AT3G19300NP_566630.1 STYKc 328..594 CDD:214568 80/276 (29%)
STKc_IRAK 332..594 CDD:270968 80/272 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 128 1.000 Inparanoid score I1899
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.050

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