DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Csk and AT3G06620

DIOPT Version :10

Sequence 1:NP_731611.2 Gene:Csk / 41398 FlyBaseID:FBgn0262081 Length:1052 Species:Drosophila melanogaster
Sequence 2:NP_187314.1 Gene:AT3G06620 / 819841 AraportID:AT3G06620 Length:773 Species:Arabidopsis thaliana


Alignment Length:769 Identity:177/769 - (23%)
Similarity:284/769 - (36%) Gaps:182/769 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   423 QLSQSQPHIVPP---------------SIPPHHHHHRENNVHPIQAGA-------------AAAL 459
            :|.:||.|:...               |:.||....|.     |..||             |:.|
plant    15 ELEESQEHLKQEMSRLKVSTELRQRSHSVSPHRPARRN-----IGEGAPSWRKSGAASFRNASPL 74

  Fly   460 HLSSHALNSHNLISSASNHSPKSPSQTQQQQQTTNQQQQQQQQQASHS------ILSTFAPAPTV 518
            ...|...||..|.|......|.:...|.:|....    .|...||.|:      |:...|.|..|
plant    75 RKESRIQNSMRLRSEVGGGGPSAGKFTDKQYLNI----LQSMAQAVHAFDLNMRIIFWNAMAEKV 135

  Fly   519 ---AAVQPAGSQSV--------AGTAAAVAA------------VAQQQQQQHLQLLANCPP---- 556
               :|.:..|...:        |..|..:|.            ..:.:.......:..|.|    
plant   136 YGYSAAEALGENPINVIADDRDAAFAMNIARRCVRGESWTGEFPVKSKSGDRFSAVTTCSPFYDD 200

  Fly   557 GGA--GLMSSSLNAAQMGMHGAERALPPK-SLA-LSGSQHGSNMLLHTAPQPPQASQPAAVVGVS 617
            .||  |::..:.|.|..        |.|: ||| |...:.|....:      |..:..|:.:|:.
plant   201 DGALMGIICITSNTAPY--------LNPRISLAKLKAQEEGETSSI------PARNSFASKLGLD 251

  Fly   618 GSGS-----------------AGMSTSLHSFDINGV----TAGSGVNASSAWSSGSTTAMNHASL 661
            ..|:                 |...:.|.|...|.|    .||......|...||.:...:|...
plant   252 SRGAVISKLGLDSDQPIQVAIASKISDLASKVSNKVRSKMRAGDNSATLSEGGSGDSHQKDHNVF 316

  Fly   662 SPTAL-----APQQGRSRCEVKLNAMPWFHGSITRDEAEHLLQPREDGLFLVRESTNFPGDYTLC 721
            ..|.:     |...|.|.........|:  |..|.::.:.:.:|.:|      .|....|...:.
plant   317 GATLVDHRDDAASSGASTPRGDFIQSPF--GVFTCNDEKFVSKPFKD------SSDESDGKPAIH 373

  Fly   722 VCFQSKVEHYRVK------YLENKLT-------------IDDEEYFENLGQL----VAHYEA--- 760
            ....||.|.:.||      :..|:..             :.:|:..|...|:    ...||:   
plant   374 KVLTSKAEEWMVKKGLSWPWKGNEQEGSKGRPTNSVWPWVQNEQKKERCHQINPSAGVQYESHAF 438

  Fly   761 --------DADGLCTQLIKCLPKLGKQEFC-------INSKDFVDKG--WVIPEAELQLRESIGK 808
                    :|..|.:..|.. ........|       :|..|...:|  :.|...:|.:.|.:|:
plant   439 ESNKPINNEASSLWSSPINA-NSTSSASSCGSTSSSVMNKVDTDSEGLEYEILWDDLTIGEQVGQ 502

  Fly   809 GEFGDVMLGILRNEKVAVKMLKDE----GAVQKFLAEASVMTTLEHDNLVKFIGLVFTSKHLYLV 869
            |..|.|..|:.....||||:...:    ..::.|..|..:|..|.|.|::.|:|.|.:.:.|.:|
plant   503 GSCGTVYHGLWFGSDVAVKVFSKQEYSAEVIESFKQEVLLMKRLRHPNVLLFMGAVTSPQRLCIV 567

  Fly   870 TEYMSKGSLVDYLRSRGRQHITKKDQIIFAYDTASGMEYLE--AKKVVHRDLAARNVLISEDCVA 932
            :|::.:|||...|: :....:..:.:|..|.|.|.||.||.  :..::||||.:.|:|:.::...
plant   568 SEFLPRGSLFRLLQ-KSTSKLDWRRRIHMALDIARGMNYLHHCSPPIIHRDLKSSNLLVDKNWTV 631

  Fly   933 KVSDFGLAR--EECY-NLDVGKLPIKWTAPEALKNGRFSNKSDMWSFGILLWEIYSFGRVPYPRI 994
            ||:||||:|  .|.| ....||...:|.|||.|:|.....|||::|||::|||: :..::|:..:
plant   632 KVADFGLSRIKHETYLTSKSGKGTPQWMAPEVLRNESADEKSDIYSFGVVLWEL-ATEKIPWETL 695

  Fly   995 PLADVVKHVEVGY---KMEAPEGCPPEIYEMMRQAWDLNPAKRPTFAELKVKLQ 1045
            ....|:.  .||:   ::|.|:...|....:|...|..:...||||.||..||:
plant   696 NSMQVIG--AVGFMDQRLEIPKDIDPRWISLMESCWHSDTKLRPTFQELMDKLR 747

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CskNP_731611.2 SH2_csk_like 680..777 CDD:198190 21/130 (16%)
PTKc_Csk_like 793..1047 CDD:270635 85/265 (32%)
AT3G06620NP_187314.1 PAS 104..>210 CDD:441804 19/109 (17%)
STKc_MAP3K-like 500..746 CDD:270901 80/249 (32%)

Return to query results.
Submit another query.