DRSC/TRiP Functional Genomics Resources

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Protein Alignment Csk and ALE2

DIOPT Version :9

Sequence 1:NP_001262476.1 Gene:Csk / 41398 FlyBaseID:FBgn0262081 Length:1052 Species:Drosophila melanogaster
Sequence 2:NP_849998.1 Gene:ALE2 / 816549 AraportID:AT2G20300 Length:744 Species:Arabidopsis thaliana


Alignment Length:741 Identity:162/741 - (21%)
Similarity:239/741 - (32%) Gaps:255/741 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   373 FLQTTGHQM--------PPTAPLRHNKRPAPQPNAVLGAGSSGTAPGSAVGAVLLHQQQLSQSQP 429
            |.::..|||        |..||   ...||..||                               
plant    34 FTRSKAHQMHFFHPYLNPSVAP---TPSPAFSPN------------------------------- 64

  Fly   430 HIVPPSIPP--HHHHHRENNVHPIQAGAAAALHLSSHALNSHNL--ISSASNHSPKS---PSQTQ 487
               |..|||  |..|||....|  ....|.|:..|||......:  ::|....||..   |.:.|
plant    65 ---PSRIPPLRHKGHHRHRRWH--LRRNATAVSPSSHDCQQTCVEPLTSTPFGSPCGCVFPMKVQ 124

  Fly   488 QQQQTTNQQQQQQQQQASHSILSTFAPAPTVAAVQPAGSQSVAGT------AAAVAAVAQQQQQQ 546
                                :|.:.||............:..|||      ...:.|.|..:.|.
plant   125 --------------------LLLSVAPFSIFPVTNELEIEVAAGTYLEQSQVKIMGASADSENQG 169

  Fly   547 HLQLLANCPPGGAGLMSSSLNAA-QMGMHGAERALPPKSLALSGSQHGSNMLLHTA-PQPPQASQ 609
            ...:..|..|.|....:::.... |...|        |.:.|:.:..|...:.|.: |..|.:|.
plant   170 KTVVDINLVPLGEKFDNTTATLIYQRFRH--------KKVPLNETVFGDYEVTHISYPGIPSSSP 226

  Fly   610 PAAVVG---------VSGSGSAGMSTSLHSFDINGVTAGSG-------VNASSAWSSGSTTAMNH 658
            ...|.|         ::.:..|..|..: .|....:.|.||       |.|.|..........:.
plant   227 NGDVTGDAPGGLPIPINATTFANKSQGI-GFRTIAIIALSGFVLILVLVGAISIIVKWKKIGKSS 290

  Fly   659 ASLSPTALAPQQGRSRCEVKLNAMPWFHGSITRDEAEHLLQPREDGLFLVRESTNFPGDYTLCVC 723
            .::.| ||||         .:|..|. .||:....|      |..|                   
plant   291 NAVGP-ALAP---------SINKRPG-AGSMFSSSA------RSSG------------------- 319

  Fly   724 FQSKVEHYRVKYLENKLTIDDEEYFENLGQLVAHYEADADGLCTQLIKCLPKLGKQEFCINSKDF 788
                                                  :|.|.:.:..|         .::.|.|
plant   320 --------------------------------------SDSLMSSMATC---------ALSVKTF 337

  Fly   789 VDKGWVIPEAE-----LQLRESIGKGEFGDVMLGILRN-EKVAVKML--KDEGAVQKFLAEASVM 845
                 .:.|.|     ...:..:|:|.||.|..|.:.: .:||||:|  .::...::|:||..::
plant   338 -----TLSELEKATDRFSAKRVLGEGGFGRVYQGSMEDGTEVAVKLLTRDNQNRDREFIAEVEML 397

  Fly   846 TTLEHDNLVKFIGLVFTSKHLYLVTEYMSKGSLVDYLRSRGRQHITKKD---QIIFAYDTASGME 907
            :.|.|.||||.||:....:...|:.|.:..||:..:|      |....|   ::..|...|.|:.
plant   398 SRLHHRNLVKLIGICIEGRTRCLIYELVHNGSVESHL------HEGTLDWDARLKIALGAARGLA 456

  Fly   908 YLEA---KKVVHRDLAARNVLISEDCVAKVSDFGLAREECYNLDVGKLPIK--------WTAPEA 961
            ||..   .:|:|||..|.|||:.:|...||||||||||    ...|...|.        :.|||.
plant   457 YLHEDSNPRVIHRDFKASNVLLEDDFTPKVSDFGLARE----ATEGSQHISTRVMGTFGYVAPEY 517

  Fly   962 LKNGRFSNKSDMWSFGILLWEIYSFGRVPYPRIPLADVVKHVEVGYKMEAPEGCPPEIYEMMRQA 1026
            ...|....|||::|:|::|.|:.: ||.|                ..|..|.|      |.....
plant   518 AMTGHLLVKSDVYSYGVVLLELLT-GRRP----------------VDMSQPSG------EENLVT 559

  Fly  1027 WDLNPAKRPTFAELKVKLQLLNNATA 1052
            |     .||..|..:...||::.|.|
plant   560 W-----ARPLLANREGLEQLVDPALA 580

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CskNP_001262476.1 SH2_csk_like 680..777 CDD:198190 10/96 (10%)
PTKc_Csk_like 793..1047 CDD:270635 80/275 (29%)
STYKc 800..1044 CDD:214568 77/260 (30%)
ALE2NP_849998.1 STKc_IRAK 355..619 CDD:270968 81/264 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 128 1.000 Inparanoid score I1899
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.050

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