DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Csk and Fgr

DIOPT Version :9

Sequence 1:NP_001262476.1 Gene:Csk / 41398 FlyBaseID:FBgn0262081 Length:1052 Species:Drosophila melanogaster
Sequence 2:NP_077059.2 Gene:Fgr / 79113 RGDID:621319 Length:517 Species:Rattus norvegicus


Alignment Length:509 Identity:180/509 - (35%)
Similarity:256/509 - (50%) Gaps:64/509 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   581 PPKSLALSGSQHGSNMLLHTAPQP---------PQASQPAAV-VG----VSGSGSAGMSTSLHSF 631
            |.:.:.|.|............|.|         ||...||.: ||    |||:| ..:..:|:.:
  Rat    13 PKEDVGLEGDFRSQGAEERYYPDPTQGRSSSISPQPISPAFLNVGNIRSVSGTG-VTIFVALYDY 76

  Fly   632 DI---NGVTAGSGV------NASSAW------SSGSTTAMNHASLSPTALAPQQGRSRCEVKLNA 681
            :.   :.:|...|.      |....|      |||.|..:....::|..            .:.|
  Rat    77 EARTGDDLTFTKGEKFHILNNTEYDWWEARSLSSGRTGYVPSNYVAPVD------------SIQA 129

  Fly   682 MPWFHGSITRDEAEH--LLQPREDGLFLVRESTNFPGDYTLCV--CFQSK---VEHYRVKYLE-N 738
            ..|:.|.|:|.:||.  |......|.||:|||....|.|:|.:  ..|::   ::||:::.|: .
  Rat   130 EEWYFGKISRKDAERQLLSDGNPQGAFLIRESETTKGAYSLSIRDWDQNRGDHIKHYKIRKLDMG 194

  Fly   739 KLTIDDEEYFENLGQLVAHYEADADGLCTQL-IKCLPKLGKQEFCINSKDFVDKGWVIPEAELQL 802
            ...|.....||::..||.||....||||..| ..|:  :.|.:....:||    .|.|....:.|
  Rat   195 GYYITTRAQFESVQDLVRHYMEVNDGLCYLLTAPCM--VMKPQTLGLAKD----AWEIDRNSIAL 253

  Fly   803 RESIGKGEFGDVMLGILR-NEKVAVKMLKDEGAVQK-FLAEASVMTTLEHDNLVKFIGLVFTSKH 865
            ...:|.|.||||.||... :.|||||.||......| ||.||.:|..|.||.||:...:| :.:.
  Rat   254 DRRLGTGCFGDVWLGTWNCSTKVAVKTLKPGTMSPKAFLEEAQIMKLLRHDKLVQLYAVV-SEEP 317

  Fly   866 LYLVTEYMSKGSLVDYLRSRGRQHITKKDQIIFAYDTASGMEYLEAKKVVHRDLAARNVLISEDC 930
            :|:|||:|..|||:|:|:.|...::...:.:..|...|.||.|:|....:||||.|.|:|:.|..
  Rat   318 IYIVTEFMCYGSLLDFLKDRKGHNLMLPNLVDMAAQVAEGMAYMERMNYIHRDLRAANILVGEHL 382

  Fly   931 VAKVSDFGLAR---EECYNLDVG-KLPIKWTAPEALKNGRFSNKSDMWSFGILLWEIYSFGRVPY 991
            :.|::||||||   ::.||...| |.|||||||||...|||:.|||:|||||||.|:.:.|||||
  Rat   383 ICKIADFGLARLIVDDEYNPQQGTKFPIKWTAPEAALFGRFTVKSDVWSFGILLTELITKGRVPY 447

  Fly   992 PRIPLADVVKHVEVGYKMEAPEGCPPEIYEMMRQAWDLNPAKRPTFAELKVKLQ 1045
            |.:...:|::.||.||.|..|.|||..:||:|.|.|.|:|.:||||..|:..|:
  Rat   448 PGMNNREVLEQVEHGYHMPCPPGCPVSLYEVMEQTWRLDPEERPTFEYLQSFLE 501

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CskNP_001262476.1 SH2_csk_like 680..777 CDD:198190 34/105 (32%)
PTKc_Csk_like 793..1047 CDD:270635 118/259 (46%)
STYKc 800..1044 CDD:214568 115/249 (46%)
FgrNP_077059.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 17..46 4/28 (14%)
SH3 68..125 CDD:418401 10/56 (18%)
SH2_Src_Fgr 128..228 CDD:198230 33/99 (33%)
PKc_like 255..502 CDD:419665 115/248 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0197
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D248674at33208
OrthoFinder 1 1.000 - - FOG0000006
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.820

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