DRSC/TRiP Functional Genomics Resources

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Protein Alignment Csk and ptk6b

DIOPT Version :9

Sequence 1:NP_001262476.1 Gene:Csk / 41398 FlyBaseID:FBgn0262081 Length:1052 Species:Drosophila melanogaster
Sequence 2:NP_001070140.1 Gene:ptk6b / 767734 ZFINID:ZDB-GENE-060929-1150 Length:511 Species:Danio rerio


Alignment Length:458 Identity:152/458 - (33%)
Similarity:230/458 - (50%) Gaps:32/458 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   602 PQPPQASQPAAVVGVSGSGSA--GMSTSLHSFDINGVTAGSGVNASSAWSSGSTTAMNHASLSPT 664
            |.||.|:..||:........|  ....|..:.|...:|..||    ..|::.........:   |
Zfish    59 PLPPSANNNAAIYMALWDFKARNDQELSFKAGDKFEITDRSG----DWWTANKKDIFGRVT---T 116

  Fly   665 ALAPQQGRSRCEVKLNAMPWFHGSITRDEA-EHLLQPRED-GLFLVRESTNFPGDYTLCVCFQSK 727
            ...|....:|..|:  :.|||.|.:.|..| .||:....: |.||||.|.:....|.|.|..:..
Zfish   117 GFVPYNYLARDSVE--SQPWFFGKMNRVGAVSHLMSDENNYGSFLVRVSESDDMGYVLSVRTKEN 179

  Fly   728 VEHYRVKYLENKLTIDDEEYFENLGQLVAHYEAD----ADGLCTQLIKCLPKLGKQEFCINSKDF 788
            .:|:::....::..:|....|.::.:::.||::.    .|.|....|:..|:        |....
Zfish   180 AKHFKIFQTGDQFYVDALFKFSSIVEVIEHYQSHPLSIGDLLSEPCIRIKPE--------NVPPP 236

  Fly   789 VDKGWVIPEAELQLRESIGKGEFGDVMLGILRN-EKVAVKMLKDEGA--VQKFLAEASVMTTLEH 850
            ....|.:|:.|.||...:|.|.|.||..|..:| .|||:|:||:..|  :::|..|..:|..|.|
Zfish   237 STDEWELPKEEFQLENQLGSGHFADVYSGKWKNHSKVAIKILKNNDALVLREFQLEVQIMKRLRH 301

  Fly   851 DNLVKFIGLVFTSKHLYLVTEYMSKGSLVDYLRSRGRQHITKKDQIIFAYDTASGMEYLEAKKVV 915
            .:|:....:..:|...|::||.:.||.|:.:||:...:.:..:..|..|...|.||.||||...:
Zfish   302 KHLISLFAVCTSSSPFYIITELIEKGDLLHFLRNPEGRSLQMESLIDMAAQVADGMAYLEANNSI 366

  Fly   916 HRDLAARNVLISEDCVAKVSDFGLAR---EECYNLDVGKLPIKWTAPEALKNGRFSNKSDMWSFG 977
            ||||||||||:.:..|.|::||||||   |..|..|..|:|.|||||||:.:|.:|:|||:||||
Zfish   367 HRDLAARNVLVGDGYVCKIADFGLARIIKEPVYLSDDKKIPYKWTAPEAIGHGTYSSKSDVWSFG 431

  Fly   978 ILLWEIYSFGRVPYPRIPLADVVKHV-EVGYKMEAPEGCPPEIYEMMRQAWDLNPAKRPTFAELK 1041
            |||:||.:.|.:|||.:...:|...: :..|:|.:|..||..||.:||..|.:....||.|..||
Zfish   432 ILLYEIVTHGGIPYPGVNTGEVYDLITKENYRMPSPPKCPQAIYNIMRACWRIESVDRPNFKVLK 496

  Fly  1042 VKL 1044
            .:|
Zfish   497 DEL 499

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CskNP_001262476.1 SH2_csk_like 680..777 CDD:198190 26/102 (25%)
PTKc_Csk_like 793..1047 CDD:270635 108/259 (42%)
STYKc 800..1044 CDD:214568 104/250 (42%)
ptk6bNP_001070140.1 SH3_Brk 70..126 CDD:212781 9/62 (15%)
SH2 132..216 CDD:214585 22/83 (27%)
PTKc_Srm_Brk 241..502 CDD:133248 108/259 (42%)
STYKc 250..499 CDD:214568 103/248 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0197
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D248674at33208
OrthoFinder 1 1.000 - - FOG0000006
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.820

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