DRSC/TRiP Functional Genomics Resources

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Protein Alignment Csk and abl2

DIOPT Version :10

Sequence 1:NP_731611.2 Gene:Csk / 41398 FlyBaseID:FBgn0262081 Length:1052 Species:Drosophila melanogaster
Sequence 2:XP_005166946.1 Gene:abl2 / 570636 ZFINID:ZDB-GENE-020809-2 Length:1182 Species:Danio rerio


Alignment Length:583 Identity:197/583 - (33%)
Similarity:285/583 - (48%) Gaps:86/583 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   485 QTQQQQQTTNQQQQQQQQQASHSILSTFAPAPTVAAVQPAGSQSVAGTAAAVAAVAQQQQQQHLQ 549
            |||.|    :||||.:..:||.|                 |.:...|.....:.:.         
Zfish    17 QTQPQ----SQQQQGRSNRASSS-----------------GRRPRDGGGGGSSTLT--------- 51

  Fly   550 LLANCPPGGAG------LMSSSLNAAQMGMHGAERALPPKSLALSGSQHGSNM--LLHTAPQPPQ 606
             |...|||.:.      :....:|...:......|.....|.||:.:...|:.  ||..|...| 
Zfish    52 -LTGTPPGRSAAAAVNIMPDPGINVFTLHSEALHRPFGLDSTALTEAVRWSSKENLLGAAESDP- 114

  Fly   607 ASQPAAVVGVSGSGSAGMSTSLHSFDING-----VTAGS-----GVNASSAWSSGSTTAMNHASL 661
                            .:..:|:.|..:|     :|.|.     |.|.:..||  ...:.|....
Zfish   115 ----------------NLFVALYDFVASGDNTLSITKGEKLRVLGYNQNGEWS--EVRSKNGQGW 161

  Fly   662 SPT-ALAPQQGRSRCEVKLNAMPWFHGSITRDEAEHLLQPREDGLFLVRESTNFPGDYTLCVCFQ 725
            .|: .:.|..       .|....|:||.::|..||:||....:|.||||||.:.||..::.:.::
Zfish   162 VPSNYITPVN-------SLEKHSWYHGPVSRSAAEYLLSSLINGSFLVRESESSPGQLSISLRYE 219

  Fly   726 SKVEHYRVKYL-ENKLTIDDEEYFENLGQLVAHYEADADGLCTQLIKCLPKLGKQEFCINSKDFV 789
            .:|.|||:... :.|:.:..|..|..|.:||.|:...||||.|.|....||..|.  .:.....:
Zfish   220 GRVYHYRINTASDGKVYVTAESRFSTLAELVHHHSTVADGLVTTLHYPAPKCNKP--TVYGVSPI 282

  Fly   790 DKGWVIPEAELQLRESIGKGEFGDVMLGILR--NEKVAVKMLK-DEGAVQKFLAEASVMTTLEHD 851
            ...|.:...::.::..:|.|::|:|.:|:.:  |..||||.|| |...|::||.|||||..::|.
Zfish   283 HDKWEMERTDITMKHKLGGGQYGEVYVGVWKKYNLTVAVKTLKEDTMEVEEFLKEASVMKEVKHP 347

  Fly   852 NLVKFIGLVFTSKHLYLVTEYMSKGSLVDYLRSRGRQHITKKDQIIFAYDTASGMEYLEAKKVVH 916
            |||:.:|:.......|:|||||..|:|:||||...|..:.....:..|...:|.|||||.|..:|
Zfish   348 NLVQLLGVCTLEPPFYIVTEYMPHGNLLDYLRECERDQVNAVVLLYMATQISSAMEYLEKKNFIH 412

  Fly   917 RDLAARNVLISEDCVAKVSDFGLAR---EECYNLDVG-KLPIKWTAPEALKNGRFSNKSDMWSFG 977
            |||||||.|:.|:.|.||:||||:|   .:.|....| |.||||||||:|....||.|||:|:||
Zfish   413 RDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFG 477

  Fly   978 ILLWEIYSFGRVPYPRIPLADVVKHVEVGYKMEAPEGCPPEIYEMMRQAWDLNPAKRPTFAEL 1040
            :|||||.::|..|||.|.|:.|...:|.||:||.||||||::||:||..|..:|..||:|||:
Zfish   478 VLLWEIATYGMSPYPGIDLSQVYDLLEKGYRMEQPEGCPPKVYELMRACWQWSPLDRPSFAEI 540

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CskNP_731611.2 SH2_csk_like 680..777 CDD:198190 36/97 (37%)
PTKc_Csk_like 793..1047 CDD:270635 120/255 (47%)
abl2XP_005166946.1 SH3_Abl 116..169 CDD:212784 11/54 (20%)
SH2_ABL 174..267 CDD:198189 34/92 (37%)
PTKc_Abl 286..548 CDD:270645 120/255 (47%)
FABD 1057..1182 CDD:197885
Blue background indicates that the domain is not in the aligned region.

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