DRSC/TRiP Functional Genomics Resources

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Protein Alignment Csk and btk

DIOPT Version :9

Sequence 1:NP_001262476.1 Gene:Csk / 41398 FlyBaseID:FBgn0262081 Length:1052 Species:Drosophila melanogaster
Sequence 2:XP_021336920.1 Gene:btk / 568653 ZFINID:ZDB-GENE-070531-1 Length:640 Species:Danio rerio


Alignment Length:382 Identity:135/382 - (35%)
Similarity:214/382 - (56%) Gaps:29/382 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   679 LNAMPWFHGSITRDEAEHLLQ-PREDGLFLVRESTNFPGDYTLCVCFQSKVE------HYRVKYL 736
            |....|:..:|.|.:||:||: ..:||.||||:|..|.|.||:.|..::..|      ||.:   
Zfish   254 LEKYDWYCKNINRSQAENLLKTENKDGGFLVRDSGKFTGKYTVSVFTKAGGETSGSCRHYNI--- 315

  Fly   737 ENKLTIDDEEY------FENLGQLVAHYEADADGLCTQLIKCLPKLGKQEFCINSKDFVDKGWVI 795
              .||.|.:.|      |.|:.:|:.:::.:|.||.::|...:....:...|.....:  ..|.|
Zfish   316 --LLTADGQFYLAEKHNFTNIPELINYHQHNAAGLVSRLKYIVSNRAQNAPCTAGLGY--GSWEI 376

  Fly   796 PEAELQLRESIGKGEFGDVMLGILR-NEKVAVKMLKDEGAVQK--FLAEASVMTTLEHDNLVKFI 857
            ...:|.....:|.|:||.|..|..: ...||:||:| ||::.:  |:.||.||..|.|.|||:..
Zfish   377 DPRQLTFIRELGNGQFGVVKYGKWQGRHDVAIKMVK-EGSMSEDDFIEEAKVMMKLCHGNLVQLY 440

  Fly   858 GLVFTSKHLYLVTEYMSKGSLVDYLRSRGRQHITKKDQIIFAYDTASGMEYLEAKKVVHRDLAAR 922
            |:....:.:|:||||::.|.|::||: .|..:.|....:....|.:.||:||||.:.:|||||||
Zfish   441 GVCTKQRPIYIVTEYLANGCLLNYLQ-EGLLNPTSIALLEMCKDVSEGMKYLEANQFIHRDLAAR 504

  Fly   923 NVLISEDCVAKVSDFGLAR---EECYNLDVG-KLPIKWTAPEALKNGRFSNKSDMWSFGILLWEI 983
            |.|:..:...||:||||:|   ::.|...|| |.|::|:.||.|...:||:|||:|:||:|:|||
Zfish   505 NCLVDSNGTIKVTDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLLYCKFSSKSDIWAFGVLMWEI 569

  Fly   984 YSFGRVPYPRIPLADVVKHVEVGYKMEAPEGCPPEIYEMMRQAWDLNPAKRPTFAEL 1040
            |:.||:||.|....::|:.:..|:::..|:.....::.:|...|...|.:||||.||
Zfish   570 YTQGRMPYDRWNNTEIVEKISAGHRLYRPQMANENVFAIMNSCWHERPDERPTFQEL 626

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CskNP_001262476.1 SH2_csk_like 680..777 CDD:198190 33/109 (30%)
PTKc_Csk_like 793..1047 CDD:270635 100/255 (39%)
STYKc 800..1044 CDD:214568 98/248 (40%)
btkXP_021336920.1 PH_Btk 6..145 CDD:269944
SH3 195..249 CDD:327375
SH2 252..357 CDD:326550 34/107 (32%)
PKc_like 376..630 CDD:328722 99/253 (39%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000006
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

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