DRSC/TRiP Functional Genomics Resources

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Protein Alignment Csk and fgfr1b

DIOPT Version :10

Sequence 1:NP_731611.2 Gene:Csk / 41398 FlyBaseID:FBgn0262081 Length:1052 Species:Drosophila melanogaster
Sequence 2:NP_001155204.1 Gene:fgfr1b / 567905 ZFINID:ZDB-GENE-060503-14 Length:740 Species:Danio rerio


Alignment Length:590 Identity:175/590 - (29%)
Similarity:274/590 - (46%) Gaps:138/590 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   516 PTVAAVQPAGSQSVAGTAAAVAAVAQQQQQQHLQLLANCPPGGAGLMSSSLNAAQMGMHGAERAL 580
            |.:.|..||...:|.|:............|.|:|.|.:.          .:|.:|:|..|    |
Zfish   175 PILYAGLPANRTAVVGSDVEFVCKVFSDPQPHIQWLKHI----------RVNGSQLGPDG----L 225

  Fly   581 P-PKSLALSGSQHGSNMLLHTAPQPPQASQPAAVVGVSGSGSAGMSTSLHSFDINGVTAGS--GV 642
            | .:.|..:|        |:|..:..:..|...|    ....||..|.|         ||:  |:
Zfish   226 PYVRVLKTAG--------LNTTDKEMEVLQLRNV----SFEDAGEYTCL---------AGNSIGI 269

  Fly   643 NASSAWSSGSTTAMNHASLSPTALAPQQGRSRCEVKLNAMPWFHGSITRDEAEHLLQPREDGLFL 707
            :..|||    .|.:.    :|||.:....:|..||.:..:.:|.                  :||
Zfish   270 SHHSAW----LTVVK----APTAPSAVPSQSYLEVLIYCIGFFL------------------IFL 308

  Fly   708 ---------VRESTNFPGDYTLCVCFQSKVEHYRVKY---LENKLTIDDEEYFE-NLG-QLVAHY 758
                     :|.|:. ..|      |.|::..:::..   |..::|:..|.... |.| .||...
Zfish   309 MVGIATIVKIRSSSK-KSD------FNSQLAVHKLAKSIPLRRQITVSVESSSSLNSGVMLVRPS 366

  Fly   759 EADADGLCTQLIKCLPKLGKQEFCINSKDFVDKGWVIPEAELQLRESIGKGEFGDVMLGIL---- 819
            ...:.|  |.::.     |..|:.:..    |..|.:....|.|.:.:|:|.||.|::|..    
Zfish   367 RLSSSG--TPMLS-----GVSEYELPQ----DPCWEVSRERLVLGKPLGEGCFGQVVMGEAIGLD 420

  Fly   820 -----RNEKVAVKMLKDEGAVQK----FLAEASVMTTL-EHDNLVKFIGLVFTSKHLYLVTEYMS 874
                 |..||||||||.: |.:|    .::|..:|..: :|.|::..:|.......||::.|:.|
Zfish   421 KDKPNRITKVAVKMLKSD-ATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEFAS 484

  Fly   875 KGSLVDYLRSRGRQH---------------ITKKDQIIFAYDTASGMEYLEAKKVVHRDLAARNV 924
            ||:|.:|||:| |.|               ::.||.:..||..|.|||||.:||.:|||||||||
Zfish   485 KGNLREYLRAR-RPHGMEYCYNPDPLPIESMSIKDLVSCAYQVARGMEYLASKKCIHRDLAARNV 548

  Fly   925 LISEDCVAKVSDFGLAREECYNLDV------GKLPIKWTAPEALKNGRFSNKSDMWSFGILLWEI 983
            |::||.|.|::|||||| :.:::|.      |:||:||.|||||.:..::::||:||||:|||||
Zfish   549 LVTEDNVMKIADFGLAR-DVHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 612

  Fly   984 YSFGRVPYPRIPLADVVKHVEVGYKMEAPEGCPPEIYEMMRQAWDLNPAKRPTF----AELKVKL 1044
            ::.|..|||.:|:.::.|.:..|::|:.|..|..|:|.||:..|...|.:||||    .:|...|
Zfish   613 FTLGGSPYPGVPVEELFKLLREGHRMDKPSACTQELYLMMKDCWHAVPTQRPTFKQLVEDLDRTL 677

  Fly  1045 QLLNN 1049
            .|::|
Zfish   678 SLISN 682

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CskNP_731611.2 SH2_csk_like 680..777 CDD:198190 17/110 (15%)
PTKc_Csk_like 793..1047 CDD:270635 114/292 (39%)
fgfr1bNP_001155204.1 IgI_2_FGFR 73..167 CDD:409443
Ig strand A 73..76 CDD:409443
Ig strand A' 84..89 CDD:409443
Ig strand B 93..101 CDD:409443
Ig strand C 107..112 CDD:409443
Ig strand C' 115..117 CDD:409443
Ig strand D 126..129 CDD:409443
Ig strand E 133..138 CDD:409443
Ig strand F 147..154 CDD:409443
Ig strand G 157..167 CDD:409443
Ig 175..278 CDD:472250 32/141 (23%)
Ig strand B 193..197 CDD:409353 0/3 (0%)
Ig strand C 206..210 CDD:409353 2/3 (67%)
Ig strand E 244..248 CDD:409353 0/3 (0%)
Ig strand F 258..263 CDD:409353 2/13 (15%)
Ig strand G 271..274 CDD:409353 0/2 (0%)
Protein Kinases, catalytic domain 383..684 CDD:473864 117/307 (38%)
Blue background indicates that the domain is not in the aligned region.

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