DRSC/TRiP Functional Genomics Resources

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Protein Alignment Csk and frk

DIOPT Version :9

Sequence 1:NP_001262476.1 Gene:Csk / 41398 FlyBaseID:FBgn0262081 Length:1052 Species:Drosophila melanogaster
Sequence 2:XP_021324228.1 Gene:frk / 567549 ZFINID:ZDB-GENE-110411-7 Length:512 Species:Danio rerio


Alignment Length:414 Identity:157/414 - (37%)
Similarity:228/414 - (55%) Gaps:24/414 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   648 WSSGSTTAM--NHASLSP-TALAPQQGRSRCEVKLNAMPWFHGSITRDEAEHLL--QPREDGLFL 707
            |.|.:.|.:  |.....| ..:||.:       .|:|.||:.....|.:||.:|  |..:.|.||
Zfish    89 WFSKAITGISANKKGYIPANYVAPVE-------SLDAEPWYFPETKRSDAEKMLISQENKKGAFL 146

  Fly   708 VRESTNFPGDYTLCVCFQSKVEHYRVKYLEN-KLTIDDEEYFENLGQLVAHYEADADGLCTQLIK 771
            :|...:.||:.:|.|....||:||:::.|:| ...:.....|..|.:||.||....||||.:|.:
Zfish   147 IRNCESQPGELSLSVRDDVKVKHYKIRKLDNGGYYLSTARNFPTLRELVEHYSKHEDGLCVRLAE 211

  Fly   772 CLPKLGKQEFCINSKDFVDKGWVIPEAELQLRESIGKGEFGDVMLGILRN-EKVAVKMLKDEGAV 835
            ...|....|....|.:.||: |.|..:.::|.:.:|.|:||:|..|:..: ..||||.||.....
Zfish   212 PCKKSVAPETHGLSYNTVDQ-WEIERSSVKLLKQLGAGQFGEVFEGLWNDTTPVAVKTLKPGNMD 275

  Fly   836 QK-FLAEASVMTTLEHDNLVKFIGLVFTSKHLYLVTEYMSKGSLVDYLRSRGRQHITKKDQIIFA 899
            .| ||.||.:|..|.|..|::...:....:.:|::||.||.|||::||::.....:...|||...
Zfish   276 PKDFLREAQIMKKLRHSKLIQLYAVCTLEEPIYIITELMSNGSLLEYLQNDRGATLRMSDQIDMG 340

  Fly   900 YDTASGMEYLEAKKVVHRDLAARNVLISEDCVAKVSDFGLAR-------EECYNLDVG-KLPIKW 956
            ...||||.|||.:..:||||||||||:.::.|.||:||||||       :..|....| |.|:||
Zfish   341 AQVASGMAYLELQNYIHRDLAARNVLVGDNNVCKVADFGLARVFQMDNEDNVYEAKEGTKFPVKW 405

  Fly   957 TAPEALKNGRFSNKSDMWSFGILLWEIYSFGRVPYPRIPLADVVKHVEVGYKMEAPEGCPPEIYE 1021
            |||||:...:|:.|||:|||||||:||.:||:.|||.:....||:.:..||:|.:|..|...:|:
Zfish   406 TAPEAINENKFTIKSDVWSFGILLYEIVTFGQTPYPTMTNFQVVQQLPKGYRMSSPPNCHKCLYD 470

  Fly  1022 MMRQAWDLNPAKRPTFAELKVKLQ 1045
            :|...|...||.||||..|:.||:
Zfish   471 IMLDCWKDVPADRPTFETLQWKLE 494

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CskNP_001262476.1 SH2_csk_like 680..777 CDD:198190 34/99 (34%)
PTKc_Csk_like 793..1047 CDD:270635 111/263 (42%)
STYKc 800..1044 CDD:214568 107/253 (42%)
frkXP_021324228.1 SH3_Src_like 56..109 CDD:212779 5/19 (26%)
SH2_Src_family 117..212 CDD:199827 33/94 (35%)
PTKc_Frk_like 230..500 CDD:270653 112/266 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0197
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D248674at33208
OrthoFinder 1 1.000 - - FOG0000006
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.820

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