DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Csk and jak3

DIOPT Version :9

Sequence 1:NP_001262476.1 Gene:Csk / 41398 FlyBaseID:FBgn0262081 Length:1052 Species:Drosophila melanogaster
Sequence 2:XP_002663133.4 Gene:jak3 / 561370 ZFINID:ZDB-GENE-070725-4 Length:1103 Species:Danio rerio


Alignment Length:1033 Identity:227/1033 - (21%)
Similarity:388/1033 - (37%) Gaps:298/1033 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   189 TTTTTSATSAKHESSPPIDARLLNFLRCAHRKFQASKAKTELQQTKDRFLG-----NSRERTSKN 248
            ||:..|.....|..    |.:.:|.|           |:.::::|..|||.     ::.||:.|.
Zfish   188 TTSYKSCLPETHRQ----DIQRMNRL-----------ARYQIRKTLKRFLKKLGKCSAGERSLKL 237

  Fly   249 GQQTSRS-LPPIASSEE-------WFDEEAQARKTSHEKSQKPKPKPEENHKEKEAISRKASGEG 305
            ......| |.|...||.       |.::..|.|                      .::.|.||||
Zfish   238 KYLMKLSELEPDYGSESFPLHHSGWLEQSEQQR----------------------VLAVKVSGEG 280

  Fly   306 -------------------DLITVEIKQGLLRKQ--------TATTTTGQAMNSH---ATATQNG 340
                               .:|.:.||: |.::|        |.|....|.|.:.   .|...:.
Zfish   281 GIQIQKTDRQEWQTFCDFPQIIDISIKR-LCQEQMPLEGRVVTLTRQDDQCMEAEFQTLTDALSF 344

  Fly   341 QTTVVGHHRGFSQPSVTVAAAAATGSTAGD-------PWFLQTTGHQMPPTAP------LRHNKR 392
            .:.|.|:.|..:..:....|..|..|...|       |...:...|::.....      |||:.:
Zfish   345 VSLVDGYFRLTTDSTHYFCAEVAPPSLLEDIQNYCHGPITSEFAVHKLKKAGGKNGMFLLRHSPK 409

  Fly   393 PAPQ---------------PNAVLGAGSSGTAPGSAVGAVLLHQ----QQLSQSQPHIVPPSI-- 436
            ...:               .:.::......:..|.....:.|.|    .|||......:|.::  
Zfish   410 EFDKYFLTVCIQTPLGMDYKDCLIEKNEKFSLAGIHNSFINLKQLIDFYQLSTLYVSDIPVTLGK 474

  Fly   437 --PPHHHH------HRENNVHPIQAGAAAALHLSSHALNSHNLISSASNHSPKSPSQTQQQQQTT 493
              ||....      .|.:::..|.:......|..|| :..|.:     .|.....|::..|...|
Zfish   475 CCPPRAKELTNMIIIRNSSMTEIPSSPTLQRHKPSH-MQFHMI-----KHEDLIWSESLGQGSFT 533

  Fly   494 N---QQQQQQQQQASHSILSTFAPAPTVAAVQPAGSQSVAGTAAAVAAVAQQQQQQHLQLLANCP 555
            :   ..:..|:...:||       ...:..|..|..::...:....|::..|...:||.|:.   
Zfish   534 HIFRGSKIDQRDGGTHS-------TEVLLKVLDANHKNCWESLFEAASLMSQISHRHLLLVY--- 588

  Fly   556 PGGAGLMSSSLNAAQMGMHGAERALPPKSLALSGS---------------------QHGS----N 595
             |.:...|.::...:...|||......:|:.:|.|                     .||:    |
Zfish   589 -GISVHKSKNIMVQEFVKHGALDLYLKRSMCVSVSWKLDVAKQLACALNFLEEKNIAHGNICAKN 652

  Fly   596 MLLHTAPQPP--QASQPAAVVGVSGSGSAGMSTSLHSFDINGVTAGSGVNASSAWSSGSTTAMNH 658
            :||......|  :.|.|            |:|.||...|:        |.....|          
Zfish   653 LLLVREGDSPFIKLSDP------------GVSMSLLGKDV--------VLDRIPW---------- 687

  Fly   659 ASLSPTALAPQQGRSRCEVKLNAMPWFHGSITRD---EAEHLLQPREDGLFLVRESTNFPGDYTL 720
              ::|..|      ...|::|....|..|:...:   ..|..||    ||.|::           
Zfish   688 --VAPEVL------DTLEIELECDKWSFGTTLWEIFNGGEAPLQ----GLDLMQ----------- 729

  Fly   721 CVCFQSKVEHYRVKYLENKLTIDDEEYFENLGQLVAH---YEADADGLCTQLIKCLPKLGKQEF- 781
                       ::::.||...:...|:.| |.:|::|   |:.:....|..:|:.|..|...:: 
Zfish   730 -----------KLQFYENFSNLPTLEWTE-LAELISHCMQYQPELRPSCRSIIRQLNSLITSDYE 782

  Fly   782 CINSKDFVDKG---W------------VIPEAELQLRESIGKGEFGDVML------GILRNEKVA 825
            .:::.|.:.:.   |            |..|..|:....:|||.||.|.|      |....|.||
Zfish   783 ILHATDTLPESNGFWKKLNIFKKQQEDVFEERYLRFISVLGKGNFGSVELCRYDPWGDNTGELVA 847

  Fly   826 VKMLKD--EGAVQKFLAEASVMTTLEHDNLVKFIGLVFTSKHL--YLVTEYMSKGSLVDYLRSRG 886
            ||.|:.  :..:..|..|...:::|..|.:||:.|:.:::..|  .||.||:..|||:.|: .:.
Zfish   848 VKELQSNKQATMADFQREIQTISSLHCDYIVKYKGICYSTGRLSTKLVMEYLPYGSLIGYM-EKH 911

  Fly   887 RQHITKKDQIIFAYDTASGMEYLEAKKVVHRDLAARNVLISEDCVAKVSDFGLAR-----EECYN 946
            |.::..:..::||.....|||||::.:.|||||||||:|::.|.:.|::||||.:     :|.|.
Zfish   912 RHNVGNRKLLLFASQICKGMEYLQSMRYVHRDLAARNILVASDNLVKIADFGLTKIIPVDKEYYR 976

  Fly   947 L-DVGKLPIKWTAPEALKNGRFSNKSDMWSFGILLWEIYSF---------------GRV---PYP 992
            : ..|:.|:.|.|||::...:||:|||:|||||:|.|::|:               ||.   |..
Zfish   977 VTQPGESPVFWYAPESISELKFSHKSDVWSFGIVLHELFSYCDISQNPKKLCIQKIGRYVHSPSM 1041

  Fly   993 RIPLADVVKHVEVGYKMEAPEGCPPEIYEMMRQAWDLNPAKRPTFAELKVKLQLLNNA 1050
            .|.|..::|:   .:::.||..||.:::.:|.|.|:.|...||:|:.||   .|:.|:
Zfish  1042 AIHLLTLLKN---NWRLPAPAQCPLKVHSIMMQCWEFNSENRPSFSSLK---DLIENS 1093

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CskNP_001262476.1 SH2_csk_like 680..777 CDD:198190 19/102 (19%)
PTKc_Csk_like 793..1047 CDD:270635 98/299 (33%)
STYKc 800..1044 CDD:214568 95/277 (34%)
jak3XP_002663133.4 B41 26..255 CDD:214604 20/81 (25%)
FERM_C_JAK3 251..365 CDD:275413 23/136 (17%)
SH2_Jak3 365..459 CDD:198243 11/93 (12%)
PKc_like 521..774 CDD:304357 58/328 (18%)
Pkinase_Tyr 521..773 CDD:285015 58/327 (18%)
PTKc_Jak_rpt2 811..1091 CDD:270634 97/286 (34%)
TyrKc 816..1090 CDD:197581 95/280 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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