DRSC/TRiP Functional Genomics Resources

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Protein Alignment Csk and csk

DIOPT Version :9

Sequence 1:NP_001262476.1 Gene:Csk / 41398 FlyBaseID:FBgn0262081 Length:1052 Species:Drosophila melanogaster
Sequence 2:NP_001071067.1 Gene:csk / 556454 ZFINID:ZDB-GENE-061103-493 Length:450 Species:Danio rerio


Alignment Length:445 Identity:239/445 - (53%)
Similarity:304/445 - (68%) Gaps:13/445 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly   606 QASQPA---AVVGVSGSGSAGMSTSLHSFDINGVTAGSGVNASSAWSSGSTTAMNHASLSPTALA 667
            :|:.||   .|...:..|:|.....:...|:..:.   ||.....|.....:|....::....:.
Zfish     5 EATWPAGTECVARYNFPGTADQDLPMCKGDVLTIV---GVTKDPNWYRAKNSAGREGTIPANYVQ 66

  Fly   668 PQQGRSRCEVKLNAMPWFHGSITRDEAEHLLQPREDGLFLVRESTNFPGDYTLCVCFQSKVEHYR 732
            .::| .:...||:.||||||.|||::||.||.|.|.||||||||||:||||||||....||||||
Zfish    67 KREG-VKSASKLSLMPWFHGKITREQAERLLYPPETGLFLVRESTNYPGDYTLCVSCDGKVEHYR 130

  Fly   733 VKYLENKLTIDDEEYFENLGQLVAHYEADADGLCTQLIKCLPKLGKQEFCINSKD-FVDKGWVIP 796
            :.|...||:||:|||||||.||:.||..|||||||:|||  ||:  .|..:.::| |...||.:.
Zfish   131 IIYHNGKLSIDEEEYFENLMQLMEHYTKDADGLCTRLIK--PKI--MEGTVAAQDEFSRSGWALN 191

  Fly   797 EAELQLRESIGKGEFGDVMLGILRNEKVAVKMLKDEGAVQKFLAEASVMTTLEHDNLVKFIGLVF 861
            ..||:|.::||||||||||:|..|.:|||||.:|.:...|.|:|||||||.|.|:|||:.:|::.
Zfish   192 RKELKLIQTIGKGEFGDVMVGDYRGKKVAVKCIKHDATAQAFVAEASVMTQLRHNNLVQLLGVIV 256

  Fly   862 TSK-HLYLVTEYMSKGSLVDYLRSRGRQHITKKDQIIFAYDTASGMEYLEAKKVVHRDLAARNVL 925
            ..| .||:|||||:|||||||||||||..|.....|.|:.|....||||||...|||||||||||
Zfish   257 EEKGSLYIVTEYMAKGSLVDYLRSRGRTVIGGDRLINFSMDVCKAMEYLEANNFVHRDLAARNVL 321

  Fly   926 ISEDCVAKVSDFGLAREECYNLDVGKLPIKWTAPEALKNGRFSNKSDMWSFGILLWEIYSFGRVP 990
            :|||.:||||||||.:|.....|..|||:|||:||||:..:||.|||:||:||||||||||||||
Zfish   322 VSEDNIAKVSDFGLTKEASSTQDTAKLPVKWTSPEALREKKFSTKSDVWSYGILLWEIYSFGRVP 386

  Fly   991 YPRIPLADVVKHVEVGYKMEAPEGCPPEIYEMMRQAWDLNPAKRPTFAELKVKLQ 1045
            ||||||.:||..||.||||::|:||||.:|::|:|.|.|:...||:|.:|:.|||
Zfish   387 YPRIPLKEVVPRVEKGYKMDSPDGCPPVVYDIMKQCWTLDAVVRPSFRDLREKLQ 441

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CskNP_001262476.1 SH2_csk_like 680..777 CDD:198190 67/96 (70%)
PTKc_Csk_like 793..1047 CDD:270635 154/254 (61%)
STYKc 800..1044 CDD:214568 149/244 (61%)
cskNP_001071067.1 SH3_CSK 11..67 CDD:212703 8/58 (14%)
SH2_csk_like 78..175 CDD:198190 67/100 (67%)
PTKc_Csk 188..443 CDD:133213 154/254 (61%)
STYKc 195..440 CDD:214568 149/244 (61%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 307 1.000 Domainoid score I1322
eggNOG 1 0.900 - - E2759_KOG0197
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H55818
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000006
OrthoInspector 1 1.000 - - otm24552
orthoMCL 1 0.900 - - OOG6_107422
Panther 1 1.100 - - LDO PTHR24418
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3150
SonicParanoid 1 1.000 - - X2621
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
109.840

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