DRSC/TRiP Functional Genomics Resources

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Protein Alignment Csk and ptk6a

DIOPT Version :9

Sequence 1:NP_001262476.1 Gene:Csk / 41398 FlyBaseID:FBgn0262081 Length:1052 Species:Drosophila melanogaster
Sequence 2:XP_682778.6 Gene:ptk6a / 555232 ZFINID:ZDB-GENE-081105-117 Length:563 Species:Danio rerio


Alignment Length:564 Identity:178/564 - (31%)
Similarity:260/564 - (46%) Gaps:98/564 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   573 MHGAERALPPKSLALSGSQHGSNML----LHTAPQPPQASQPAAVVGVSGSGS------------ 621
            ||......|..||:||.|...|..|    ||......:.::|||.|..|.|..            
Zfish     1 MHNLSVLHPALSLSLSLSLSLSLSLSFRNLHVKYHSSRPAKPAAKVIDSHSDEMSQEEVCCSCPG 65

  Fly   622 -----AGMSTSLHSFDINGV--TAGSGVNA-----SSAWSSGS---TTAMNHASLSPTALAPQQG 671
                 .|:.||....:....  ||...||.     :||...||   ....::.:.....|:.|:|
Zfish    66 LRAFCQGLFTSPDKTEAEKPTNTAKQTVNVPNPSRASACEPGSELYKALWSYKARGADELSFQEG 130

  Fly   672 RS--RCE--------VKL-----------------------NAMPWFHGSITRDEAE-HLLQPRE 702
            ..  .||        :||                       ...||:.|::.|.|.| .||.|..
Zfish   131 EQFRICERQGEWWTALKLGRDGAVTGRGFVPNHFLARRQTVKEQPWYFGTLNRFETEILLLAPEN 195

  Fly   703 D-GLFLVRESTNFPGDYTLCVCF---QSKVEHYRVKYLENK-LTIDDEEYFENLGQLVAH---YE 759
            | |.||||.|......|.|.|..   ..:|:|.::...:|: ..:|..:.|::|.:||.:   |.
Zfish   196 DVGAFLVRHSEKDNIGYVLSVLSGDRSREVKHIKIHQNQNESFYLDKSQTFQSLEKLVDYYWKYS 260

  Fly   760 ADADGLCTQLIKCL---PKLGKQEFCINSKDF---VDKGWVIPEAELQLRESIGKGEFGDVMLGI 818
            .|.|....|  .|.   ||         .||.   ....|.:|:.|..|.|.:|||.|.||..|.
Zfish   261 LDGDSFLKQ--PCRRPEPK---------PKDLSHSTVNDWELPKEEFTLEEELGKGFFADVYRGK 314

  Fly   819 LRN-EKVAVKMLKDEGA-VQKFLAEASVMTTLEHDNLVKFIGLVFTSKHLYLVTEYMSKGSLVDY 881
            .:. ..||:|:||::.. .::|:.|..::..|.|.:|:....:..:|...|::||.|.||.|:..
Zfish   315 WKGMVNVAIKILKNDSINHREFMLETQILKKLRHKHLIALFAVCTSSSPFYIITELMEKGDLLSL 379

  Fly   882 LRSRGRQHITKKDQIIFAYDTASGMEYLEAKKVVHRDLAARNVLISEDCVAKVSDFGLAR---EE 943
            |:.:..|.:..:.....|...|.||.|||.:..:||||||||||:..:.:.||:|.||||   |.
Zfish   380 LKGKEGQDLNAQMLTEMASQVADGMAYLEEQNSIHRDLAARNVLVGANYICKVADLGLARIVKES 444

  Fly   944 CYNLDVGKLPIKWTAPEALKNGRFSNKSDMWSFGILLWEIYSFGRVPYPRIPLADVVKHVEVGYK 1008
            .|:.:..::|.||:||||:.:||||||||:||||:||:|::::|.||||.....:|...:..||:
Zfish   445 VYSSEDAQIPYKWSAPEAISHGRFSNKSDVWSFGVLLYEMFTYGGVPYPAFSNIEVYNMITSGYR 509

  Fly  1009 MEAPEGCPPEIYEMMRQAWDLNPAKRPTFAELKVKLQLLNNATA 1052
            |.||..||..||::|...|..:..:||.|:||   |:||.:..|
Zfish   510 MPAPPNCPSHIYDIMLMCWRYSAEERPDFSEL---LRLLEDYCA 550

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CskNP_001262476.1 SH2_csk_like 680..777 CDD:198190 34/108 (31%)
PTKc_Csk_like 793..1047 CDD:270635 103/258 (40%)
STYKc 800..1044 CDD:214568 99/248 (40%)
ptk6aXP_682778.6 SH3_Brk 110..167 CDD:212781 7/56 (13%)
SH2 174..261 CDD:214585 28/86 (33%)
PKc_like 289..541 CDD:328722 100/251 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0197
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D248674at33208
OrthoFinder 1 1.000 - - FOG0000006
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.820

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