DRSC/TRiP Functional Genomics Resources

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Protein Alignment Csk and src

DIOPT Version :9

Sequence 1:NP_001262476.1 Gene:Csk / 41398 FlyBaseID:FBgn0262081 Length:1052 Species:Drosophila melanogaster
Sequence 2:XP_017953215.1 Gene:src / 496893 XenbaseID:XB-GENE-489820 Length:544 Species:Xenopus tropicalis


Alignment Length:551 Identity:197/551 - (35%)
Similarity:273/551 - (49%) Gaps:95/551 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   575 GAERALP----PKSLAL---SGSQHGSNMLLHTAPQPPQAS-----QPAAVVG----VSGSGSAG 623
            ||.::.|    |:|.:|   .||......|  :|.|.|..|     |||...|    ::..|...
 Frog     5 GATKSKPREGGPRSRSLDIAEGSHQPFTSL--SASQTPSKSLDSHRQPAQPFGGNCDLTPFGGVN 67

  Fly   624 MSTSLHSFDINGVTAGSGVNASSAWSSGSTTAM---NHASLSPTALAPQQGRSRCEVKLNAMP-- 683
            .|.::.|....|..||           |.||.:   ::.|.:.|.|:.::| .|.::..|..|  
 Frog    68 FSDTITSPQRIGPLAG-----------GVTTFVALYDYESRTETDLSFKKG-ERLQIVNNTRPDM 120

  Fly   684 ----------------------------------WFHGSITRDEAEHLLQPRED--GLFLVREST 712
                                              |:.|.|||.|||.||...|:  |.||||||.
 Frog   121 REGDWWLARSLSSGQTGYIPSNYVAPSDSIQAEEWYLGKITRREAERLLLSLENPRGTFLVRESE 185

  Fly   713 NFPGDYTLCVCFQS-----KVEHYRVKYLEN-KLTIDDEEYFENLGQLVAHYEADADGLCTQLIK 771
            ...|.|.|.|....     .|:||:::.|:: ...|.....|.:|.||||:|...|||||.:|..
 Frog   186 TTKGAYCLSVSDYDANRGLNVKHYKIRKLDSGGFYITSRTQFSSLQQLVAYYSKHADGLCHRLTT 250

  Fly   772 CLPKLGKQEFCINSKDFVDKGWVIPEAELQLRESIGKGEFGDVMLGIL-----RNEKVAVKMLKD 831
            ..|....|...: |||    .|.||...|:|...:|:|.||:|.:|:.     ...:||:|.|| 
 Frog   251 VCPTAKPQTQGL-SKD----AWEIPRDSLRLELKLGQGCFGEVWMGVSVGTWNGTTRVAIKTLK- 309

  Fly   832 EGAV--QKFLAEASVMTTLEHDNLVKFIGLVFTSKHLYLVTEYMSKGSLVDYLRSRGRQHITKKD 894
            .|.:  :.||.||.||..|.|:.||:...:| :.:.:|:||||||||||:|:|:....:::....
 Frog   310 PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-SEEPIYIVTEYMSKGSLLDFLKGEMGRYLRLPQ 373

  Fly   895 QIIFAYDTASGMEYLEAKKVVHRDLAARNVLISEDCVAKVSDFGLAR---EECYNLDVG-KLPIK 955
            .:..|...||||.|:|....|||||.|.|:|:.|:.|.||:||||||   :..|....| |.|||
 Frog   374 LVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK 438

  Fly   956 WTAPEALKNGRFSNKSDMWSFGILLWEIYSFGRVPYPRIPLADVVKHVEVGYKMEAPEGCPPEIY 1020
            ||||||...|||:.|||:|||||||.|:.:.||||||.:...:|:..||.||:|..|..||..::
 Frog   439 WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPDCPESLH 503

  Fly  1021 EMMRQAWDLNPAKRPTFAELKVKLQLLNNAT 1051
            ::|.|.|..:|.:||||..|:..|:....||
 Frog   504 DLMCQCWRKDPEERPTFEYLQAFLEDYFTAT 534

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CskNP_001262476.1 SH2_csk_like 680..777 CDD:198190 43/140 (31%)
PTKc_Csk_like 793..1047 CDD:270635 117/264 (44%)
STYKc 800..1044 CDD:214568 113/254 (44%)
srcXP_017953215.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D248674at33208
OrthoFinder 1 1.000 - - FOG0000006
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
33.010

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