DRSC/TRiP Functional Genomics Resources

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Protein Alignment Csk and ptk2b

DIOPT Version :10

Sequence 1:NP_731611.2 Gene:Csk / 41398 FlyBaseID:FBgn0262081 Length:1052 Species:Drosophila melanogaster
Sequence 2:XP_012819490.1 Gene:ptk2b / 496459 XenbaseID:XB-GENE-489525 Length:1017 Species:Xenopus tropicalis


Alignment Length:470 Identity:137/470 - (29%)
Similarity:207/470 - (44%) Gaps:116/470 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   653 TTAMNHASLSPTALAPQQGRSRCEVKLNAMPWFHGSITRDEAEHLLQPREDGLFLVRESTNFPGD 717
            |..||..|   |..:..|...|||:   |..|   |||.|   .::.|:.     :|:.|.....
 Frog   244 TRFMNTLS---TFTSIDQETYRCEL---AQGW---SITVD---LVIGPKG-----IRQLTTKDSK 291

  Fly   718 YTLCVCFQSKVEHYRVKYLENKLTIDDEEYF---------------------ENLGQLVAHYEAD 761
            .|   ||   .|..::|.::..|..|.....                     ||:..|:      
 Frog   292 PT---CF---AEFKQIKSIKCSLLEDGWALLLLGISGAPQPLAIKTSSLAVAENMADLI------ 344

  Fly   762 ADGLCTQLIKCLPKLGKQEFCINSKDFVDKGWVIPE---AELQLRES------------------ 805
             ||.|.     |....|....:|.|...:|...:|:   .|:|:|.|                  
 Frog   345 -DGYCR-----LQNESKDSLIVNPKKDNEKRISLPQIPTEEVQVRRSRLVEGNSMESDIYAEIPE 403

  Fly   806 -----------------------IGKGEFGDVMLGILRNEK-----VAVKMLKDEGAV---QKFL 839
                                   :|:|.||:|..|:....|     ||||..|::.|.   :||:
 Frog   404 VTETKLTNNRFTISRSDVALGRILGEGFFGEVYDGVYVKPKGDKINVAVKTCKNDCAADVKEKFM 468

  Fly   840 AEASVMTTLEHDNLVKFIGLVFTSKHLYLVTEYMSKGSLVDYLRSRGRQHITKKDQIIFAYDTAS 904
            :||.:|..|:|.::||.||:: ....:::|.|....|.|..|| .:.:..:.....|:::.....
 Frog   469 SEAYLMRNLDHPHIVKLIGII-EDDPIWIVMELYPYGELGQYL-EKNKNSLQVLSLILYSLQICK 531

  Fly   905 GMEYLEAKKVVHRDLAARNVLI-SEDCVAKVSDFGLAR----EECYNLDVGKLPIKWTAPEALKN 964
            .:.|||....||||:|.||:|: |.:|| |:.||||:|    ||.|...|.:|||||.|||::..
 Frog   532 ALAYLEGINCVHRDIAVRNILVASPECV-KLGDFGLSRYLEEEEYYKASVTRLPIKWMAPESINF 595

  Fly   965 GRFSNKSDMWSFGILLWEIYSFGRVPYPRIPLADVVKHVEVGYKMEAPEGCPPEIYEMMRQAWDL 1029
            .||::.||:|.||:.:|||.|||:.|:..:...||:..:|.|.::..||.|||.:|.:|.:.|..
 Frog   596 RRFTSASDVWMFGVCMWEILSFGKQPFFWLENKDVISVIEKGDRLPKPEMCPPTLYTLMTRCWTY 660

  Fly  1030 NPAKRPTFAELKVKL 1044
            :|.:||.|.||...|
 Frog   661 DPFERPKFTELVCSL 675

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CskNP_731611.2 SH2_csk_like 680..777 CDD:198190 23/117 (20%)
PTKc_Csk_like 793..1047 CDD:270635 101/309 (33%)
ptk2bXP_012819490.1 FERM_N_2 35..133 CDD:436229
B41 37..261 CDD:214604 6/19 (32%)
FERM_C_FAK1 257..364 CDD:270011 29/138 (21%)
PTKc_FAK 414..683 CDD:133187 96/265 (36%)
Focal_AT 880..1009 CDD:460992
Blue background indicates that the domain is not in the aligned region.

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