DRSC/TRiP Functional Genomics Resources

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Protein Alignment Csk and nck2

DIOPT Version :10

Sequence 1:NP_731611.2 Gene:Csk / 41398 FlyBaseID:FBgn0262081 Length:1052 Species:Drosophila melanogaster
Sequence 2:NP_001007985.1 Gene:nck2 / 493349 XenbaseID:XB-GENE-6083355 Length:381 Species:Xenopus tropicalis


Alignment Length:86 Identity:27/86 - (31%)
Similarity:51/86 - (59%) Gaps:2/86 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly   675 CEVKLNAMPWFHGSITRDEAEHLLQPR-EDGLFLVRESTNFPGDYTLCVCFQSKVEHYRVKYLEN 738
            |..:.....|::|.|||.:||..|..| .:|.|::|:|.:.|.|:::.:....|.:|::|:.:::
 Frog   277 CTGRFAGKAWYYGGITRHQAECALNERGMEGDFVIRDSESSPSDFSISLKASGKNKHFKVQLVDS 341

  Fly   739 KLTIDDEEYFENLGQLVAHYE 759
            ...| .:..|:||.:||.||:
 Frog   342 VYCI-GQRRFKNLDELVEHYK 361

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CskNP_731611.2 SH2_csk_like 680..777 CDD:198190 26/81 (32%)
PTKc_Csk_like 793..1047 CDD:270635
nck2NP_001007985.1 SH3_Nck2_1 2..59 CDD:212832
SH3_Nck2_2 115..169 CDD:212835
SH3_Nck2_3 199..257 CDD:212836
SH2 284..381 CDD:472789 26/79 (33%)
Blue background indicates that the domain is not in the aligned region.

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