DRSC/TRiP Functional Genomics Resources

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Protein Alignment Csk and htl

DIOPT Version :10

Sequence 1:NP_731611.2 Gene:Csk / 41398 FlyBaseID:FBgn0262081 Length:1052 Species:Drosophila melanogaster
Sequence 2:NP_524394.2 Gene:htl / 42160 FlyBaseID:FBgn0010389 Length:729 Species:Drosophila melanogaster


Alignment Length:319 Identity:118/319 - (36%)
Similarity:179/319 - (56%) Gaps:39/319 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   761 DADGLCTQLIKCLPKLGKQEFCI----------NSKDF-VDKGWVIPEAELQLRESIGKGEFGDV 814
            |:.|....:|..:.::.||...:          |..:| :|..|.:|.:.|.|..::|:|.||.|
  Fly   366 DSSGSMDTMIMPVVRIQKQRTTVLQNGNEPAPFNEYEFPLDSNWELPRSHLVLGATLGEGAFGRV 430

  Fly   815 MLGILRNEKVAVKMLKD---EGAVQKFLAEASVMTTL-EHDNLVKFIGLVFTSKHLYLVTEYMSK 875
            ::..:.|..|||||:|:   :..:...:.|..||..: .|.|::..:|....:..||::.||...
  Fly   431 VMAEVNNAIVAVKMVKEGHTDDDIASLVREMEVMKIIGRHINIINLLGCCSQNGPLYVIVEYAPH 495

  Fly   876 GSLVDYL---RSRGRQH---------------ITKKDQIIFAYDTASGMEYLEAKKVVHRDLAAR 922
            |:|.|:|   |..||..               ||:||.|.||:..|.||:||.:::.:|||||||
  Fly   496 GNLKDFLYKNRPFGRDQDRDSSQPPPSPPAHVITEKDLIKFAHQIARGMDYLASRRCIHRDLAAR 560

  Fly   923 NVLISEDCVAKVSDFGLARE----ECYNLDV-GKLPIKWTAPEALKNGRFSNKSDMWSFGILLWE 982
            |||:|:|.|.|::||||||:    :.|..:. |:|||||.|||:|:...:.:|||:||:||||||
  Fly   561 NVLVSDDYVLKIADFGLARDIQSTDYYRKNTNGRLPIKWMAPESLQEKFYDSKSDVWSYGILLWE 625

  Fly   983 IYSFGRVPYPRIPLA-DVVKHVEVGYKMEAPEGCPPEIYEMMRQAWDLNPAKRPTFAEL 1040
            |.::|:.|||.|..| ::..::..|.:||.|..|...||.:|||.|..|...||.|.|:
  Fly   626 IMTYGQQPYPTIMSAEELYTYLMSGQRMEKPAKCSMNIYILMRQCWHFNADDRPPFTEI 684

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CskNP_731611.2 SH2_csk_like 680..777 CDD:198190 3/15 (20%)
PTKc_Csk_like 793..1047 CDD:270635 110/276 (40%)
htlNP_524394.2 Ig 101..191 CDD:472250
Ig strand B 121..125 CDD:409353
Ig strand C 134..138 CDD:409353
Ig strand E 157..161 CDD:409353
Ig strand F 171..176 CDD:409353
Ig strand G 184..187 CDD:409353
Ig 200..289 CDD:472250
Ig strand B 216..220 CDD:409353
Ig strand C 229..233 CDD:409353
Ig strand E 255..259 CDD:409353
Ig strand F 269..274 CDD:409353
Ig strand G 282..285 CDD:409353
Protein Kinases, catalytic domain 404..692 CDD:473864 111/281 (40%)
Blue background indicates that the domain is not in the aligned region.

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