DRSC/TRiP Functional Genomics Resources

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Protein Alignment Csk and syk

DIOPT Version :10

Sequence 1:NP_731611.2 Gene:Csk / 41398 FlyBaseID:FBgn0262081 Length:1052 Species:Drosophila melanogaster
Sequence 2:XP_005155595.1 Gene:syk / 405769 ZFINID:ZDB-GENE-040702-3 Length:608 Species:Danio rerio


Alignment Length:478 Identity:162/478 - (33%)
Similarity:243/478 - (50%) Gaps:88/478 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   648 WS-SGSTTAMNHASLSPTALAPQQGRSRCEVKLNAMPWFHGSITRDEAE-HLLQ-PREDGLFLVR 709
            |: .||  |::.|.:|.   .||..:.........||||||.|.|:::| .||. .|.:|.||:|
Zfish   131 WNLKGS--ALDQAIISQ---RPQLEKLIATTAHEKMPWFHGKIDREDSELRLLNTSRVNGKFLIR 190

  Fly   710 ESTNFPGD--YTLCVCFQSKVEHYRV-KYLENKLTIDDEEYFENLGQLVAHYEADADGLCTQLIK 771
            :..|...:  |.||:...::|.|||: |....||:|.|.:.|:.|.|||.||....|||...|.:
Zfish   191 QRENSGRNESYALCLLHNNQVMHYRIDKDRAGKLSIPDGKKFDTLWQLVEHYSYKPDGLLRVLTE 255

  Fly   772 CLP----------------------------KLGKQE----FCINSKD-------FVD------- 790
            ..|                            |.|..|    ...|.||       |:|       
Zfish   256 TCPRPSHHSERGATGGIISRLKSYSFPKPGQKKGSAENPYKITPNGKDDYSKQGNFLDSAMPMDT 320

  Fly   791 -------------KGWVIPEAELQLRE-SIGKGEFGDVMLGILRNEK----VAVKMLK---DEGA 834
                         :...:..::|.|.: .:|.|.||.|:.|:.:.:|    ||||:||   |..|
Zfish   321 QVYESPYADPDELRSTKVNRSDLTLEDGELGSGNFGTVLRGVYQMKKTQKVVAVKILKNDDDNAA 385

  Fly   835 VQ-KFLAEASVMTTLEHDNLVKFIGLVFTSKHLYLVTEYMSKGSLVDYLRSRGRQHITKKDQIIF 898
            |: :.|.||:||..|::..:|:.|| :..:::|.||.|....|.|..:|:.  .:|||.|:....
Zfish   386 VKDEMLREANVMQQLDNPYIVRMIG-ICEAENLMLVMELAELGPLHKFLQK--NKHITVKNLTEL 447

  Fly   899 AYDTASGMEYLEAKKVVHRDLAARNVLISEDCVAKVSDFGLAR-----EECYNL-DVGKLPIKWT 957
            .:..:.||:|||....|||||||||||:.....||:|||||::     |..|.. ..||.|:||.
Zfish   448 VHQVSMGMKYLEEHNFVHRDLAARNVLLVTQHYAKISDFGLSKALTEDENYYKAKGHGKWPLKWY 512

  Fly   958 APEALKNGRFSNKSDMWSFGILLWEIYSFGRVPYPRIPLADVVKHVEVGYKMEAPEGCPPEIYEM 1022
            |||.:...:||:|||:||||:|:||.:|:|:.||..:...:|::.:|.|.:|.||..||||:|::
Zfish   513 APECMNYLKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVIQMIENGQRMSAPPDCPPEMYDL 577

  Fly  1023 MRQAWDLNPAKRPTFAELKVKLQ 1045
            |::.|...|.:||.|:.::.:|:
Zfish   578 MKKCWTYKPDERPGFSVVEPRLR 600

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CskNP_731611.2 SH2_csk_like 680..777 CDD:198190 42/129 (33%)
PTKc_Csk_like 793..1047 CDD:270635 105/268 (39%)
sykXP_005155595.1 SH2_N-SH2_Zap70_Syk_like 8..111 CDD:198191
SH2_C-SH2_Syk_like 159..260 CDD:198264 41/100 (41%)
PTKc_Syk 348..604 CDD:133247 103/256 (40%)
Blue background indicates that the domain is not in the aligned region.

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