DRSC/TRiP Functional Genomics Resources

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Protein Alignment Csk and Itk

DIOPT Version :9

Sequence 1:NP_001262476.1 Gene:Csk / 41398 FlyBaseID:FBgn0262081 Length:1052 Species:Drosophila melanogaster
Sequence 2:NP_001102295.2 Gene:Itk / 363577 RGDID:1311618 Length:620 Species:Rattus norvegicus


Alignment Length:415 Identity:142/415 - (34%)
Similarity:221/415 - (53%) Gaps:47/415 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   658 HASLSPTALAPQQGRSRCEVKLNAMPWFHGSITRDEAEH-LLQPREDGLFLVRESTNFPGDYTLC 721
            |...:|::...::..:    .|....|::.||:||:||. ||...::|.|:||:|.. ||.||:.
  Rat   217 HEGYAPSSYLVEKSPN----SLETYEWYNKSISRDKAEKLLLDTGKEGAFMVRDSRT-PGTYTVS 276

  Fly   722 V-----------CFQSKVEHYRVKYLEN---KLTIDDEEYFENLGQLVAHYEADADGLCTQLIKC 772
            |           |    ::||.:|...:   :..:.::..|:::..|:.:::.:..||.|:|   
  Rat   277 VFTKAIISENNPC----IKHYHIKETNDSPKRYYVAEKYVFDSIPLLIQYHQYNGGGLVTRL--- 334

  Fly   773 LPKLGKQEFCI-NSKDFVDKG-----WVIPEAELQLRESIGKGEFGDVMLGI-LRNEKVAVKMLK 830
                 :...|. ..|..|..|     |||..:||...:.||.|:||.|.||. |..:|||:|.::
  Rat   335 -----RYPVCSWRQKAPVTAGLRYGKWVIQPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIQ 394

  Fly   831 DEGAV--QKFLAEASVMTTLEHDNLVKFIGLVFTSKHLYLVTEYMSKGSLVDYLRSRGRQHITKK 893
             |||:  :.|:.||.||..|.|..||:..|:......:.||.|:|..|.|.|||||: |.....:
  Rat   395 -EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRSQ-RGLFAAE 457

  Fly   894 DQIIFAYDTASGMEYLEAKKVVHRDLAARNVLISEDCVAKVSDFGLAR---EECYNLDVG-KLPI 954
            ..:....|...||.|||...|:||||||||.|:.|:.|.||||||:.|   ::.|....| |.|:
  Rat   458 TLLGMCLDVCEGMAYLEKACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPV 522

  Fly   955 KWTAPEALKNGRFSNKSDMWSFGILLWEIYSFGRVPYPRIPLADVVKHVEVGYKMEAPEGCPPEI 1019
            ||.:||.....|:|:|||:||||:|:||::|.|::||.....::||:.:..|:::..|....|.:
  Rat   523 KWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASPHV 587

  Fly  1020 YEMMRQAWDLNPAKRPTFAELKVKL 1044
            |::|...|...|..||.|:.|..:|
  Rat   588 YQVMNHCWKEKPEDRPPFSRLLSQL 612

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CskNP_001262476.1 SH2_csk_like 680..777 CDD:198190 29/111 (26%)
PTKc_Csk_like 793..1047 CDD:270635 106/259 (41%)
STYKc 800..1044 CDD:214568 101/250 (40%)
ItkNP_001102295.2 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0197
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000006
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.810

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