DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Csk and Ripk2

DIOPT Version :10

Sequence 1:NP_731611.2 Gene:Csk / 41398 FlyBaseID:FBgn0262081 Length:1052 Species:Drosophila melanogaster
Sequence 2:NP_001178794.1 Gene:Ripk2 / 362491 RGDID:1309167 Length:539 Species:Rattus norvegicus


Alignment Length:262 Identity:62/262 - (23%)
Similarity:118/262 - (45%) Gaps:52/262 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   823 KVAVK-------MLKDEGAVQKFLAEASVMTTLEHDNLVKFIGLVFTSKHLYLVTEYMSKGSLVD 880
            :||||       :|..|.  ...|.||.::.......::..:|:....:.|.:|||||..|||.:
  Rat    43 RVAVKHLHIHTPLLDSER--NDILREAEILHKARFSYILPILGICNEPEFLGIVTEYMPNGSLNE 105

  Fly   881 YLRSRGRQHITKKDQIIF------AYDTASGMEYLEAKK--VVHRDLAARNVLISEDCVAKVSDF 937
            .|..:     |:..:|.:      .::.|.|:.||....  ::|.||..:|:|:..:...|::||
  Rat   106 LLHRK-----TEYPEIAWPLRFRILHEIALGVNYLHNMNPPLLHHDLKTQNILLDNEFHVKIADF 165

  Fly   938 GLAREECYNLDVGKL--------PIKWTAPEALKNG---RFSNKSDMWSFGILLWEIYSFGRVPY 991
            ||::....:|...:.        .|.:..||..:.|   |.|.|.|::|:.:::||:.|      
  Rat   166 GLSKWRMMSLSQSRSYKSAPEGGTIIYMPPENYEPGQKSRASVKHDIYSYAVIMWEVLS------ 224

  Fly   992 PRIPLADVVKHVEVGYKME-------APEGCPPEI------YEMMRQAWDLNPAKRPTFAELKVK 1043
            .:.|..:|...:::.|.:.       :.|..|.:|      ..:::..|..||.:||:|.:..::
  Rat   225 RKQPFEEVTNPLQIMYSVSQGHRPNTSEENLPFDIPHRGLMISLIQSGWAQNPDERPSFLKCLIE 289

  Fly  1044 LQ 1045
            |:
  Rat   290 LE 291

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CskNP_731611.2 SH2_csk_like 680..777 CDD:198190
PTKc_Csk_like 793..1047 CDD:270635 62/262 (24%)
Ripk2NP_001178794.1 STKc_RIP2 20..303 CDD:270928 62/262 (24%)
CARD_RIP2_CARD3 437..523 CDD:176764
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.