DRSC/TRiP Functional Genomics Resources

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Protein Alignment Csk and hop

DIOPT Version :9

Sequence 1:NP_001262476.1 Gene:Csk / 41398 FlyBaseID:FBgn0262081 Length:1052 Species:Drosophila melanogaster
Sequence 2:NP_511119.2 Gene:hop / 32080 FlyBaseID:FBgn0004864 Length:1177 Species:Drosophila melanogaster


Alignment Length:259 Identity:94/259 - (36%)
Similarity:140/259 - (54%) Gaps:25/259 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   802 LRESIGKGEFGDVMLGILR-------NEKVAVKMLKDEGAVQKFLAEASVMTTLEHDNLVKFIGL 859
            :...||:|.:|.|..|.|.       .|:||:|||........|..|..:|.||.|.|:|||  .
  Fly   894 MENMIGRGHYGTVYKGHLEFNDKDQPREQVAIKMLNTMQVSTDFHREIGIMRTLSHPNIVKF--K 956

  Fly   860 VFTSKHLYLVTEYMSKGSLVDYLRSRGRQHITKKDQIIFAYDTASGMEYLEAKKVVHRDLAARNV 924
            .:..|...::.||:..||...|||... .::.....:.||.|.|:||:||....::||||||||:
  Fly   957 YWAEKSHCIIMEYLQSGSFDIYLRFTA-PNLNNPRLVSFALDIANGMKYLSDMGLIHRDLAARNI 1020

  Fly   925 LISE----DCVAKVSDFGLAR---EECYNLDVGK--LPIKWTAPEALKNGRFSNKSDMWSFGILL 980
            |:..    ||| |:||||||:   .:.|.....|  :||:|.:|||:...|||:.||:||:|:.|
  Fly  1021 LVDHNGDGDCV-KISDFGLAQFANSDGYYYAKSKRDIPIRWYSPEAISTCRFSSYSDVWSYGVTL 1084

  Fly   981 WEIYSFGRVPYPRIPL----ADVVKHVEVGYKMEAPEGCPPEIYEMMRQAWDLNPAKRPTFAEL 1040
            :|::|.|..| ..:|:    .|.:..::.|.::..|..||..||::|:..|...|..||:||.:
  Fly  1085 FEMFSRGEEP-NLVPIQTSQEDFLNRLQSGERLNRPASCPDFIYDLMQLCWHATPRSRPSFATI 1147

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CskNP_001262476.1 SH2_csk_like 680..777 CDD:198190
PTKc_Csk_like 793..1047 CDD:270635 94/259 (36%)
STYKc 800..1044 CDD:214568 94/259 (36%)
hopNP_511119.2 B41 39..259 CDD:214604
SH2_Jak_family 420..516 CDD:198177
PTK_Jak_rpt1 584..836 CDD:270633
PTKc_Jak_rpt2 886..1155 CDD:270634 94/259 (36%)
TyrKc 894..1151 CDD:197581 94/259 (36%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0197
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.810

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