DRSC/TRiP Functional Genomics Resources

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Protein Alignment Csk and Wsck

DIOPT Version :9

Sequence 1:NP_001262476.1 Gene:Csk / 41398 FlyBaseID:FBgn0262081 Length:1052 Species:Drosophila melanogaster
Sequence 2:NP_733018.1 Gene:Wsck / 318600 FlyBaseID:FBgn0046685 Length:791 Species:Drosophila melanogaster


Alignment Length:691 Identity:149/691 - (21%)
Similarity:250/691 - (36%) Gaps:226/691 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   537 AAVAQQQQQQHLQL-----LAN----CPPGGAGLMS--SSLNAAQMGMH---------------- 574
            |.|.:.|:||..||     |||    |  ||.|:.|  |::...|.|.|                
  Fly    87 ANVLEPQEQQDEQLCNTRCLANKAQYC--GGVGVHSYYSTILTKQPGPHHLRISNKTENSLTLSW 149

  Fly   575 ------------GAERALPPKSLALSGSQHGSNML-----LHTAPQPPQASQPAAVVGVSGSGSA 622
                        |||..||.:.|        .|.|     |.|....|...||..:|        
  Fly   150 NAYEARKLLLAGGAEAVLPNQLL--------DNFLIKAQVLKTYSSLPAFPQPEFMV-------- 198

  Fly   623 GMST------------SLHSFDINGVTAGSGVNASSAWSSGSTTAMNHASL-SPTALAPQ-QGRS 673
             .||            :|::..:..:...:.|..|.. ...|..|.....| ||....|: ..|:
  Fly   199 -QSTETQFELTDLHPATLYNISVRAMCKDAQVGQSEC-GQASIEATTEVGLPSPVPAQPKILSRT 261

  Fly   674 RCEVKLNAMP----------------WFHGSITRDEAEHLL----QPREDGL------------- 705
            ...|.:...|                :...::::.....||    |.::||:             
  Fly   262 DRTVTIELSPIRNDNGPLSKLLVIVEYVDNALSQPFDAQLLGSWQQAQQDGVPYYIAAELDYDRP 326

  Fly   706 -------FLVRES------TNFPGDYT---------LCVCFQ--SKVEHYRVKYLENKLTIDDEE 746
                   |:|.:.      ||.|.|..         |....:  :|..:.|..:.::..::||..
  Fly   327 EDNRTRRFVVGDGKRYGRFTNKPLDQPDAHVHISLGLVSTLEGVTKTMYSRGTHDQHVTSLDDFS 391

  Fly   747 Y--FENLGQ--------------------LVAHY---------------------------EADA 762
            |  ||. ||                    |:|::                           |.:.
  Fly   392 YATFEK-GQSSVVALAVTCVIFGSCLLLSLIAYFYLRYKTCRGRRLTGGNTHEMTLQTPIIEREN 455

  Fly   763 DGLCTQ--LIKCLPKLGKQEFCINSKDFVDKGWVIPEAELQL--RESIGKGEFGDVMLG------ 817
            :|...:  .:...|:..||:.    :..|:....||...|:|  .:.||.|.||:::.|      
  Fly   456 NGYLVEDDPLPHSPENFKQQL----QQLVEGYERIPRNALRLNVNDVIGDGRFGEIITGKVSTND 516

  Fly   818 ILRNEKVAVKMLKD-EGAVQ-KFLAEASVMTTLE-HDNLVKFIGLVFTSKHLYLVTEY--MS-KG 876
            ..|:..:.|..|.| .|..| :.|.|...::.|: .::|:.|.|:..:....||:.|.  || |.
  Fly   517 FARDCTLHVLCLDDLNGTTQAQLLRELRQLSQLKRQEHLLDFYGVSASPDWFYLIFEQQRMSLKR 581

  Fly   877 SLVDYLRSRGRQHITK-KDQII--FAYDTASGMEYLEAKKVVHRDLAARNVLISEDCVAKVSDFG 938
            .||:.........:|. .:|::  :.|:.||.|.||.:.:||||.|.:.:|.::.|...|:|.||
  Fly   582 KLVESRLMAPSPRLTSLSEQLVLQWIYELASAMNYLSSCQVVHRQLCSHSVFVTSDFKLKLSVFG 646

  Fly   939 ------LAREE-CYNLDVGKLPIKWTAPEALKN-GRFSNKSDMWSFGILLWEIYSFGRVPYPRIP 995
                  :||:: .:|        :|.|||.|:: ...|.:||:||...:.||..:.|..||....
  Fly   647 PLPYMNIARQQPDHN--------RWLAPEVLRHQHHHSTRSDVWSLACVAWECCALGGTPYANAV 703

  Fly   996 LAD--VVKHVEVGYKMEAPEGCPPEIYEMMRQAWDLNPAKR 1034
            .::  :::.:....:...|.....::|:::...|.|.|::|
  Fly   704 ASNQQLLEAIRAAVRPAQPAYVYGDLYQLLLNCWQLEPSER 744

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CskNP_001262476.1 SH2_csk_like 680..777 CDD:198190 27/204 (13%)
PTKc_Csk_like 793..1047 CDD:270635 73/269 (27%)
STYKc 800..1044 CDD:214568 71/262 (27%)
WsckNP_733018.1 WSC 42..115 CDD:280068 11/29 (38%)
fn3 130..222 CDD:278470 19/108 (18%)
TyrKc 493..746 CDD:197581 70/260 (27%)
PTKc 497..750 CDD:270623 69/256 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24418
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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