DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Csk and ABL2

DIOPT Version :9

Sequence 1:NP_001262476.1 Gene:Csk / 41398 FlyBaseID:FBgn0262081 Length:1052 Species:Drosophila melanogaster
Sequence 2:NP_009298.1 Gene:ABL2 / 27 HGNCID:77 Length:1182 Species:Homo sapiens


Alignment Length:566 Identity:195/566 - (34%)
Similarity:284/566 - (50%) Gaps:73/566 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   501 QQQASHSILSTFAPAPTVAAVQPAGSQSVAGTAAAVAAVAQQQQQQHLQLLANCPPGG------A 559
            ||.....|..:.|..|:.....|||..:..|.....       |..|   .|:|...|      .
Human    15 QQPQPRGIRGSSAARPSGRRRDPAGRTTETGFNIFT-------QHDH---FASCVEDGFEGDKTG 69

  Fly   560 GLMSSSLNAAQMGMHGAERALPPKSL--ALSGSQHGSNMLLHTAPQPPQASQPAAVVGVSGSGSA 622
            |....:|:..    :|.:  :.|::|  |:..|.. .|:|..|...|                  
Human    70 GSSPEALHRP----YGCD--VEPQALNEAIRWSSK-ENLLGATESDP------------------ 109

  Fly   623 GMSTSLHSFDING-----VTAGS-----GVNASSAWSSGSTTAMNHASLSPT-ALAPQQGRSRCE 676
            .:..:|:.|..:|     :|.|.     |.|.:..||  ...:.|.....|: .:.|..      
Human   110 NLFVALYDFVASGDNTLSITKGEKLRVLGYNQNGEWS--EVRSKNGQGWVPSNYITPVN------ 166

  Fly   677 VKLNAMPWFHGSITRDEAEHLLQPREDGLFLVRESTNFPGDYTLCVCFQSKVEHYRVK-YLENKL 740
             .|....|:||.::|..||:||....:|.||||||.:.||..::.:.::.:|.|||:. ..:.|:
Human   167 -SLEKHSWYHGPVSRSAAEYLLSSLINGSFLVRESESSPGQLSISLRYEGRVYHYRINTTADGKV 230

  Fly   741 TIDDEEYFENLGQLVAHYEADADGLCTQLIKCLPKLGKQEFCINSKDFVDKGWVIPEAELQLRES 805
            .:..|..|..|.:||.|:...||||.|.|....||..|.  .:.....:...|.:...::.::..
Human   231 YVTAESRFSTLAELVHHHSTVADGLVTTLHYPAPKCNKP--TVYGVSPIHDKWEMERTDITMKHK 293

  Fly   806 IGKGEFGDVMLGILRNEK--VAVKMLK-DEGAVQKFLAEASVMTTLEHDNLVKFIGLVFTSKHLY 867
            :|.|::|:|.:|:.:...  ||||.|| |...|::||.||:||..::|.|||:.:|:.......|
Human   294 LGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTLEPPFY 358

  Fly   868 LVTEYMSKGSLVDYLRSRGRQHITKKDQIIFAYDTASGMEYLEAKKVVHRDLAARNVLISEDCVA 932
            :|||||..|:|:||||...|:.:|....:..|...:|.|||||.|..:||||||||.|:.|:.|.
Human   359 IVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHVV 423

  Fly   933 KVSDFGLAR---EECYNLDVG-KLPIKWTAPEALKNGRFSNKSDMWSFGILLWEIYSFGRVPYPR 993
            ||:||||:|   .:.|....| |.||||||||:|....||.|||:|:||:|||||.::|..|||.
Human   424 KVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPG 488

  Fly   994 IPLADVVKHVEVGYKMEAPEGCPPEIYEMMRQAWDLNPAKRPTFAE 1039
            |.|:.|...:|.||:||.||||||::||:||..|..:||.||:|||
Human   489 IDLSQVYDLLEKGYRMEQPEGCPPKVYELMRACWKWSPADRPSFAE 534

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CskNP_001262476.1 SH2_csk_like 680..777 CDD:198190 36/97 (37%)
PTKc_Csk_like 793..1047 CDD:270635 120/254 (47%)
STYKc 800..1044 CDD:214568 119/247 (48%)
ABL2NP_009298.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..47 9/31 (29%)
CAP 2..106 23/107 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 60..80 3/23 (13%)
SH3_Abl 111..164 CDD:212784 11/54 (20%)
SH2_ABL 169..262 CDD:198189 34/92 (37%)
PTKc_Abl 281..543 CDD:270645 120/254 (47%)
Pkinase_Tyr 288..539 CDD:285015 119/247 (48%)
Kinase activation loop. /evidence=ECO:0000250 427..451 10/23 (43%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 611..641
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 654..674
Nuclear localization signal. /evidence=ECO:0000255 658..660
F-actin-binding. /evidence=ECO:0000250 694..930
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 763..794
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 807..851
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 964..1024
F-actin-binding. /evidence=ECO:0000250 1020..1182
FABD 1063..1182 CDD:197885
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000006
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.910

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