DRSC/TRiP Functional Genomics Resources

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Protein Alignment Csk and Ros1

DIOPT Version :10

Sequence 1:NP_731611.2 Gene:Csk / 41398 FlyBaseID:FBgn0262081 Length:1052 Species:Drosophila melanogaster
Sequence 2:XP_038954373.1 Gene:Ros1 / 25346 RGDID:3591 Length:2339 Species:Rattus norvegicus


Alignment Length:745 Identity:186/745 - (24%)
Similarity:281/745 - (37%) Gaps:232/745 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   457 AALHLSSHALNSHN-LISSASNHSPKSPSQTQQQQQTTNQQQQQQQQQASHSILSTFAPAPTVAA 520
            |..|:::..|:..: |:....:|.|..|.:..:.|                .::|..||.|....
  Rat  1553 AVCHINATVLSDTSLLVFWTESHKPNGPKELVRYQ----------------LVMSYLAPIPETPL 1601

  Fly   521 VQ---PAGSQSVAGTAAAVAAVAQQQQQQHLQLLANCPPGGAGLMSSSLNAAQMGMHGAERALPP 582
            .|   |:...|:..|..:..      ||..|::|| |                   |..|     
  Rat  1602 RQDEFPSARLSLLVTKLSGG------QQYVLKILA-C-------------------HSEE----- 1635

  Fly   583 KSLALSGSQHGSNMLLHTAPQPPQASQPAAVVGVSGSGSAGMSTSLHSFDINGVTAGSGVNASSA 647
               ......|..::.:...|:.|.|..|.             :|||    :....|.|..|.:..
  Rat  1636 ---MWCTESHPVSVNMFDTPEKPSALVPE-------------NTSL----LLDWKAPSNANLTRF 1680

  Fly   648 W------------------SSGSTTAMNHASLSP-----------------TALAPQQGRSRCEV 677
            |                  |.|.....|.|:|.|                 ::..|:..:::..|
  Rat  1681 WFELQKWKYSEFYHVKASCSQGPVYVCNIANLQPYTPYNIRVVVVYTTGENSSSIPESFKTKAGV 1745

  Fly   678 -------KL-----NAMPW----------------FHGSITRDEAEHLL---------------- 698
                   ||     |::.|                ...||:.|..:..|                
  Rat  1746 PSKPGIPKLLEGSKNSIQWEKAEDNGNRLMYYTLEVRKSISNDSRDQSLRWTAVFNGSCSSICTW 1810

  Fly   699 ---------QPR----------------------EDGLFLVRES---TNFPGDYTLC------VC 723
                     |.|                      |||.::...|   |...|.:.:.      |.
  Rat  1811 RSKNLKGTFQFRAVASNAIGFGEYSEISEDITLVEDGFWITETSFILTIIVGIFLVATVPLTFVW 1875

  Fly   724 FQSKVEHYRVKYLENKLTIDDEEYFENLGQLVAHYEADADGLCTQLIKCLPKLGKQEFCINSKDF 788
            .:|...|...|...:.|..:|:|..|..|.......|:|   | ..:..||          :::.
  Rat  1876 HRSLKNHKATKEGLSVLNDNDQELAELRGLAAGVGLANA---C-YAVHTLP----------TQEE 1926

  Fly   789 VDKGWVIPEAELQLRESIGKGEFGDV-------MLGILRNE-KVAVKMLKDEGAVQ---KFLAEA 842
            ::.....|..:|.||..:|.|.||:|       :||....| |||||.||.....|   :||.||
  Rat  1927 IESLPAFPREKLSLRLLLGSGAFGEVYEGTAVDILGRGSGEIKVAVKTLKKGSTDQEKIEFLKEA 1991

  Fly   843 SVMTTLEHDNLVKFIGLVFTSKHLYLVTEYMSKGSLVDYLR-SRGR----QHITKKDQIIFAYDT 902
            .:|:...|.|::|.:|:...|:..|::.|.|..|.|:.||| :||.    ..:|..|.:....|.
  Rat  1992 HLMSKFNHPNILKQLGVCLLSEPQYIILELMEGGDLLSYLRKARGTTLSGPLLTLADLVELCVDI 2056

  Fly   903 ASGMEYLEAKKVVHRDLAARNVLIS-----EDCVAKVSDFGLAREECYNLDV------GKLPIKW 956
            :.|..|||....:||||||||.|:|     ...|.|:.|||||| |.|..|.      |.||::|
  Rat  2057 SKGCVYLEQMHFIHRDLAARNCLVSVKDYTSPRVVKIGDFGLAR-EIYKHDYYRKRGEGLLPVRW 2120

  Fly   957 TAPEALKNGRFSNKSDMWSFGILLWEIYSFGRVPYPRIPLADVVKHVEVGYKMEAPEGCPPEIYE 1021
            .|||.|.:|.|:::||:||||||:|||.:.|..|||.....||:.:|:.|.::|.|..||.:::.
  Rat  2121 MAPENLMDGIFTSQSDVWSFGILVWEILTLGHQPYPAHSNLDVLNYVQAGGRLEPPRNCPDDLWN 2185

  Fly  1022 MMRQAWDLNPAKRPTFAELKVKLQLLNNAT 1051
            :|.:.|...|.:||||..::.:|||..|.:
  Rat  2186 LMFRCWAQEPDQRPTFYNIQDQLQLFRNVS 2215

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CskNP_731611.2 SH2_csk_like 680..777 CDD:198190 28/168 (17%)
PTKc_Csk_like 793..1047 CDD:270635 110/280 (39%)
Ros1XP_038954373.1 FN3 <99..>296 CDD:442628
FN3 567..663 CDD:238020
FN3 1036..1142 CDD:238020
FN3 1449..1527 CDD:214495
FN3 1551..1630 CDD:238020 19/98 (19%)
FN3 1650..1741 CDD:238020 18/107 (17%)
FN3 1746..1839 CDD:238020 10/92 (11%)
PTKc_c-ros 1948..2209 CDD:270640 102/261 (39%)
Blue background indicates that the domain is not in the aligned region.

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