DRSC/TRiP Functional Genomics Resources

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Protein Alignment Csk and ptk2bb

DIOPT Version :10

Sequence 1:NP_731611.2 Gene:Csk / 41398 FlyBaseID:FBgn0262081 Length:1052 Species:Drosophila melanogaster
Sequence 2:NP_001410482.1 Gene:ptk2bb / 245950 ZFINID:ZDB-GENE-020507-1 Length:1004 Species:Danio rerio


Alignment Length:342 Identity:109/342 - (31%)
Similarity:175/342 - (51%) Gaps:63/342 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   749 ENLGQLVAHYEADADGLC---------------------TQLIKCLPKL--GKQ--EFCINSKDF 788
            ||:..|:       ||.|                     .||...||::  ||:  .|..::.|.
Zfish   338 ENMADLI-------DGYCRLFNHTDSSVIAGPNKNKSQGVQLRNSLPEIPSGKKTDSFRYSNSDI 395

  Fly   789 VDKGWVIPE-------------AELQLRESIGKGEFGDVMLGILRNE-----KVAVKMLKD--EG 833
            ..:   ||:             .::.|:..:|:|.||:|..|:.:.:     .||||..|:  ..
Zfish   396 YCE---IPDEKPPPPAKVGLSRKDISLKRMLGEGFFGEVHEGVYQKKNGEKVNVAVKTCKECAPD 457

  Fly   834 AVQKFLAEASVMTTLEHDNLVKFIGLVFTSKHLYLVTEYMSKGSLVDYLRSRGRQHITKKDQIIF 898
            ..:||:.||.:|..|:|.::|:.|| |.....:::|.|...:|.|..|| ::.:|.:|....::|
Zfish   458 IREKFVGEAVIMKNLDHPHIVRLIG-VIEEDPVWIVMELCQQGELGKYL-TKNQQSLTSVTLVLF 520

  Fly   899 AYDTASGMEYLEAKKVVHRDLAARNVLI-SEDCVAKVSDFGLAR----EECYNLDVGKLPIKWTA 958
            :......:.||:...:||||:|.||||: :.:|| |:.||||:|    ||.|...|.:|||||.|
Zfish   521 SLQLCKALVYLQGMNMVHRDIAVRNVLVATPECV-KLGDFGLSRYIEDEEYYKASVTRLPIKWMA 584

  Fly   959 PEALKNGRFSNKSDMWSFGILLWEIYSFGRVPYPRIPLADVVKHVEVGYKMEAPEGCPPEIYEMM 1023
            ||::...||:..||:|.|.:.:|||.:.|:.|:..:...||:..:|.|.::..||.|||.:|.:|
Zfish   585 PESINFRRFTAASDVWMFAVCVWEIMNRGKQPFHWLDNRDVINQLEQGNRLPKPEQCPPALYSLM 649

  Fly  1024 RQAWDLNPAKRPTFAEL 1040
            .:.|..:|.:||||.||
Zfish   650 TRCWSYDPRERPTFTEL 666

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CskNP_731611.2 SH2_csk_like 680..777 CDD:198190 10/50 (20%)
PTKc_Csk_like 793..1047 CDD:270635 95/273 (35%)
ptk2bbNP_001410482.1 FERM_N_2 36..133 CDD:436229
B41 38..261 CDD:214604
FERM_C_FAK1 257..364 CDD:270011 6/32 (19%)
PTKc_FAK 410..678 CDD:133187 93/260 (36%)
Focal_AT 860..989 CDD:460992
Blue background indicates that the domain is not in the aligned region.

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