DRSC/TRiP Functional Genomics Resources

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Protein Alignment Csk and Srms

DIOPT Version :10

Sequence 1:NP_731611.2 Gene:Csk / 41398 FlyBaseID:FBgn0262081 Length:1052 Species:Drosophila melanogaster
Sequence 2:NP_035611.4 Gene:Srms / 20811 MGIID:101865 Length:496 Species:Mus musculus


Alignment Length:376 Identity:139/376 - (36%)
Similarity:217/376 - (57%) Gaps:20/376 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   683 PWFHGSITRDEAEHLL--QPREDGLFLVRESTNFPGDYTLCVCFQSKVEHYRVKYL-ENKLTIDD 744
            ||:...|:|.:|:.||  .....|.||:|.|.:..|.|:|.|..|:||.|||:... ...|.:.:
Mouse   123 PWYFSGISRAQAQQLLLSPANAPGAFLIRPSESSIGGYSLSVRAQAKVCHYRICMAPSGSLYLQE 187

  Fly   745 EEYFENLGQLVAHYEADADGLCTQLIK-CLPKLGKQEFCINSKDFVDKGWVIPEAELQLRESIGK 808
            .:.|.:|..|:|:|:.:...:...|:: |:|::          ..|...|..|.:|..||..:|:
Mouse   188 GQLFPSLDALLAYYKTNWKLIQNPLLQPCIPQI----------PLVQDEWERPRSEFVLRRKLGE 242

  Fly   809 GEFGDVMLGI-LRNEKVAVKMLKD-EGAVQKFLAEASVMTTLEHDNLVKFIGLVFTSKHLYLVTE 871
            |.||:|..|: |.:..||||::|. :..:.....|...:.:|.|:.|::...:....:.:|:|||
Mouse   243 GFFGEVWEGLWLGSIPVAVKVIKSADMKLADLTKEIEALKSLRHERLIRLHAICSLGEPVYIVTE 307

  Fly   872 YMSKGSLVDYLRSRGRQHITKKDQIIFAYDTASGMEYLEAKKVVHRDLAARNVLISEDCVAKVSD 936
            .|.||:|..||.|...:.::....:.||...|.||.|||.::||||||||||||:.:|...||:|
Mouse   308 LMGKGNLQVYLGSSEGKALSLPHLLGFACQVAEGMSYLEERRVVHRDLAARNVLVGDDLTCKVAD 372

  Fly   937 FGLAR---EECYNLDVG-KLPIKWTAPEALKNGRFSNKSDMWSFGILLWEIYSFGRVPYPRIPLA 997
            |||||   ::.|:...| |:|:|||||||.....||.|||:|||||||:|::::|:.||..:...
Mouse   373 FGLARLLKDDVYSPSSGSKIPVKWTAPEAANYRVFSQKSDVWSFGILLYEVFTYGQCPYEGMTNH 437

  Fly   998 DVVKHVEVGYKMEAPEGCPPEIYEMMRQAWDLNPAKRPTFAELKVKLQLLN 1048
            :.::.:..||::..|..||.|:|.:|.:.|..:|.:|||||.|:.||..:|
Mouse   438 ETLQQISRGYRLPRPAVCPAEVYVLMVECWKGSPEERPTFAILREKLNAIN 488

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CskNP_731611.2 SH2_csk_like 680..777 CDD:198190 31/97 (32%)
PTKc_Csk_like 793..1047 CDD:270635 106/259 (41%)
SrmsNP_035611.4 None

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