DRSC/TRiP Functional Genomics Resources

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Protein Alignment Csk and frk-1

DIOPT Version :10

Sequence 1:NP_731611.2 Gene:Csk / 41398 FlyBaseID:FBgn0262081 Length:1052 Species:Drosophila melanogaster
Sequence 2:NP_001369901.1 Gene:frk-1 / 191635 WormBaseID:WBGene00001487 Length:390 Species:Caenorhabditis elegans


Alignment Length:377 Identity:115/377 - (30%)
Similarity:197/377 - (52%) Gaps:21/377 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   679 LNAMPWFHGSITRDEAEHLLQPREDGLFLVRESTNFPGDYTLCVCFQSKVEHYRVKYLENKLTID 743
            :.:..::||.:.|.:||..|  :.:|.||||::...||...|.:..:...|..| .::.|.....
 Worm    18 IRSAEYYHGMVPRQDAEGFL--KREGDFLVRKTEQMPGKVVLAMSVRVTDELCR-HFMLNMDPTS 79

  Fly   744 DEEYFENLGQLVAHYEADADGLCTQLIKCLPKLGKQEFCINSKDFVDKGWVIPEAELQLRESIGK 808
            ::.|||:     .|.|:....|....:.....:.........:......|:|....:...:.:|:
 Worm    80 NKFYFEH-----THQESTISELINWHMTTKTPISAASGAKIRRPMERSPWLINHDSIVANKKLGE 139

  Fly   809 GEFGDVMLGIL---RNEKVAVKMLKDEG---AVQKFLAEASVMTTLEHDNLVKFIGLVFTSKHLY 867
            |.||||.:..|   ..::||||.::.|.   |..:|:.||.:|...:|.::||.||:......|.
 Worm   140 GAFGDVFIAELDQGGKQEVAVKTMRAEATREARLRFMKEARLMRKYQHKHVVKLIGVAIHEHPLM 204

  Fly   868 LVTEYMSKGSLVDYLRSRGRQHITKKDQIIFAYDTASGMEYLEAKKVVHRDLAARNVLISEDCVA 932
            :|.||...|||:.:|:   :..::..:::.|..:.|.|:.|||..|.:|||:||||.|:|.....
 Worm   205 IVMEYCPNGSLLSHLK---KNKVSLIEKLRFTTEAADGIAYLERSKCIHRDIAARNCLLSAKNEL 266

  Fly   933 KVSDFGLA--REECYNLDVGKLPIKWTAPEALKNGRFSNKSDMWSFGILLWEIYSFGRVPYPRI- 994
            |:||||::  ::|..:..:.|:||||.|||.::...:::|:|:|:||:|:|||||.|..|||.: 
 Worm   267 KISDFGMSDNKDEIKDETLEKVPIKWLAPETMQEKVYTHKTDIWTFGVLVWEIYSDGAEPYPGLT 331

  Fly   995 PLADVVKHVEVGYKMEAPEGCPPEIYEMMR-QAWDLNPAKRPTFAELKVKLQ 1045
            .:....|.|...|:|:.|:|..|.:.:::. ..|..||.||.|...:..||:
 Worm   332 KIQTRAKIVVNDYRMKMPDGTHPTVADVVTGTCWQKNPEKRSTMDSIHKKLR 383

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CskNP_731611.2 SH2_csk_like 680..777 CDD:198190 23/96 (24%)
PTKc_Csk_like 793..1047 CDD:270635 92/263 (35%)
frk-1NP_001369901.1 SH2_Fps_family 16..107 CDD:198224 23/96 (24%)
TyrKc 131..382 CDD:197581 88/253 (35%)

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