DRSC/TRiP Functional Genomics Resources

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Protein Alignment Csk and Y69E1A.3

DIOPT Version :9

Sequence 1:NP_001262476.1 Gene:Csk / 41398 FlyBaseID:FBgn0262081 Length:1052 Species:Drosophila melanogaster
Sequence 2:NP_502040.2 Gene:Y69E1A.3 / 190549 WormBaseID:WBGene00013475 Length:547 Species:Caenorhabditis elegans


Alignment Length:514 Identity:141/514 - (27%)
Similarity:235/514 - (45%) Gaps:128/514 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   590 SQHGSN-------MLLHTAPQPPQAS-----QPAAVVGVSGSGSAGMSTSLHSFDINGVTAGSGV 642
            |:|.|:       :.|:.||...:||     :|.|  ....||:..:|||:.|            
 Worm     6 SEHESDDDLALECVRLNDAPSDIEASDKNPNEPGA--DKLESGNKNVSTSMMS------------ 56

  Fly   643 NASSAWSSGSTTAMNHASLSPTALAPQQGRSRCEVKLNAMPWFHGSITRDEAEHLLQPREDGLFL 707
            |:||..........:|.                 :.|:.   :||.:...|||.||  ..|..:|
 Worm    57 NSSSRDDPEEDYIRSHL-----------------INLHV---YHGVLFGSEAEKLL--TWDRAYL 99

  Fly   708 VRESTNFPGDYTLCVC--FQSKVEHYRVKYLENKLTIDDEEYFENLGQLVAHYEADADG-LCTQL 769
            ||.:...|..: ||:.  :::|:.||::.:.|                         || .|.:|
 Worm   100 VRRAITKPNKF-LCISVNWKNKIFHYQLDFNE-------------------------DGWCCKKL 138

  Fly   770 IKCLPKLGKQEFCINSKDFVDKGW---------------VIPEAELQLRESIGKGEFGDVMLGIL 819
            .:..|.:..:.| ::.:..:: .|               |:..:.:.|.:.:|.|.||:|..|..
 Worm   139 YEKFPTMPNRRF-LHIRQLLE-AWSQATPFLIPTPRGSNVLIHSTINLDKKLGCGAFGEVFKGQY 201

  Fly   820 RNE-------KVAVKMLKDEG---AVQKFLAEASVMTTLEHDNLVKFIGLVFTSKHLYLVTEYMS 874
            :..       :||||.:....   .:|:|..||.:||.|:|:|:|.|.|.....:.:.:|.|.::
 Worm   202 KAVGSTNPPIEVAVKRILGNAKRKQIQEFCNEAQIMTVLQHENIVAFYGFASLEEPIMVVMELVT 266

  Fly   875 KGSLVDYLRSRGRQHITKKDQIIFAYDTASGMEYLEAKKVVHRDLAARNVLISEDCVAKVSDFGL 939
            .|.|..|.::  .|:|.|...:.||.:.||||.:|.:|.::||||||||.|:::|..||:|||||
 Worm   267 GGDLRKYFQT--TQNIPKLQILWFAMNVASGMRHLSSKGIIHRDLAARNCLVTQDLKAKISDFGL 329

  Fly   940 ARE---ECYNLDVGKLPIKWTAPEALKNGRFSNKSDMWSFGILLWEIYSFGRVP----YPRIPLA 997
            :.:   ...||:  |.||:|.|||:||:|.|:.|:|:||:|:.|.|:.:  |..    ||: .|.
 Worm   330 SLQGTVTTKNLE--KAPIRWLAPESLKSGLFNEKTDVWSYGVFLTELMT--RCEHDPLYPK-SLK 389

  Fly   998 DVVKHV---EVGYKMEAPEGCPPEIYEMMRQAWDLNPAKRPTFAELK-----VKLQLLN 1048
            |....:   |..:||:  .|.|.|:..::....:.||.:|..|..:|     :.::.||
 Worm   390 DAKAWILTEERPHKMK--NGDPKELMVLIDACCERNPNERLNFNTVKRQITDIYMEALN 446

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CskNP_001262476.1 SH2_csk_like 680..777 CDD:198190 23/99 (23%)
PTKc_Csk_like 793..1047 CDD:270635 94/293 (32%)
STYKc 800..1044 CDD:214568 92/268 (34%)
Y69E1A.3NP_502040.2 SH2 79..162 CDD:214585 25/112 (22%)
STYKc 182..437 CDD:214568 92/263 (35%)
PTKc 186..438 CDD:270623 91/260 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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