DRSC/TRiP Functional Genomics Resources

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Protein Alignment Csk and Y43C5B.2

DIOPT Version :10

Sequence 1:NP_731611.2 Gene:Csk / 41398 FlyBaseID:FBgn0262081 Length:1052 Species:Drosophila melanogaster
Sequence 2:NP_501907.1 Gene:Y43C5B.2 / 189849 WormBaseID:WBGene00012785 Length:245 Species:Caenorhabditis elegans


Alignment Length:225 Identity:49/225 - (21%)
Similarity:102/225 - (45%) Gaps:59/225 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   683 PWFHGSITRDEAEHLLQPREDGLFLVRES---TNFPGDYTLCV--C---FQSKVEHYRVKYLENK 739
            |::||.:.|::.:.:|  :.:|.|::|.|   ...|....|.|  |   .:.:::||.:|...:|
 Worm    17 PYYHGFLPREDVKTVL--KNNGDFVIRISEPQAGSPRSNILSVMHCVPPMEEEIKHYVIKTKGDK 79

  Fly   740 LTIDDEEYFENLGQLVAHYEADADGLCTQLIKCLPKLGKQEFCINSKDFVDK-----------GW 793
            :.|:...:..                       :|::  .|:.:..|:.|.|           .|
 Worm    80 IFIEKVSFLS-----------------------IPEM--VEWHLTKKESV
QKDVFLIKAISRQAW 119

  Fly   794 VIPEAELQLRESIGKGEFGDVMLGILRNEK------VAVKMLK----DEGAVQKFLAEASVMTTL 848
            .:....::..:.:|:|.||:||:|.::..|      ||:|..|    .:..:::|:.||.||.:|
 Worm   120 ELDHDNIEPLKKLGEGAFGEVMMGTMKFRKGGKSVQVAIKQAKLSNLTKEQIKEFMGEARVMRSL 184

  Fly   849 EHDNLVKFIGLVFTSKHLYL---VTEYMSK 875
            .|.::|:|.|:.....::.|   :.|:::|
 Worm   185 SHPHVVRFYGVPRRRVNVALCRSLNEFLAK 214

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CskNP_731611.2 SH2_csk_like 680..777 CDD:198190 19/101 (19%)
PTKc_Csk_like 793..1047 CDD:270635 26/96 (27%)
Y43C5B.2NP_501907.1 SH2_Fps_family 11..104 CDD:198224 21/113 (19%)
Protein Kinases, catalytic domain 129..>218 CDD:473864 25/86 (29%)

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