DRSC/TRiP Functional Genomics Resources

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Protein Alignment Csk and T06C10.3

DIOPT Version :9

Sequence 1:NP_001262476.1 Gene:Csk / 41398 FlyBaseID:FBgn0262081 Length:1052 Species:Drosophila melanogaster
Sequence 2:NP_501307.1 Gene:T06C10.3 / 188160 WormBaseID:WBGene00020289 Length:557 Species:Caenorhabditis elegans


Alignment Length:422 Identity:109/422 - (25%)
Similarity:192/422 - (45%) Gaps:47/422 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   659 ASLSPTALAPQ-QGRSRCEVKLNAMPWFHGSITRDEAEHLLQPREDGLFLVRESTNFPGDY---- 718
            ||:...::.|: :..|..|.||....::||.:.|::....|  ...|.||:|.|....|::    
 Worm   119 ASVEKLSIVPEKEDFSILEKKLREFNFYHGFLPREDLHTTL--HNPGDFLLRVSEVVEGEHKVNR 181

  Fly   719 -----TLCVCFQSKVEHYR-------VKYLENKLTIDDEEYFENLGQLVAHYEADADGLCTQLIK 771
                 .:.|...||.|..|       :|.:.|....:....||::..||.:|..:..|..:...:
 Worm   182 EVILSLIPVSTVSKDEEDRKKVRNVVIKRVTNLFFCEITRTFESISDLVTYYTKNPGGCASGTFQ 246

  Fly   772 CLPKLGKQEFCINSKDFVDKGWVIPEAELQLRESIGKGEFGDVMLGILR-----NEKVAVKMLK- 830
            .            ....:.:.|....:::.:.:.:|:|.||.|..|.|:     |..||:||.| 
 Worm   247 L------------KHPILQQSWEFMHSDVTVGKVLGEGAFGKVCSGTLKLKDGTNVDVAIKMTKV 299

  Fly   831 ----DEGAVQKFLAEASVMTTLEHDNLVKFIGLVFTSKHLYLVTEYMSKGSLVDYL-RSRGRQHI 890
                .:..:::.:.||..:....|.|:|:..|:....:.||::.|.:..|||.|:: :.:|...|
 Worm   300 SAFLSKMKIKEMMNEARFIRNFNHKNVVRLYGVAHHEQPLYILLELVKGGSLQDHMKKEKGAVSI 364

  Fly   891 TKKDQIIFAYDTASGMEYLEAKKVVHRDLAARNVLISEDCVAKVSDFGLARE-ECYNLDVG-KLP 953
            .:|  |.|......|:|||.....:|||:||||.|:.|..| |::||||:|. ..|.:... |||
 Worm   365 VEK--IKFCSGAGRGIEYLHQNNCIHRDIAARNCLLHEKEV-KITDFGLSRTGPVYKMKTACKLP 426

  Fly   954 IKWTAPEALKNGRFSNKSDMWSFGILLWEIYSFGRVPYPRIPLADVVKHVEVGYKMEAPEGCPPE 1018
            :||.|||.|....||..:|.:|:|:..:|:::.|..|:..|..:.|...:.....::.|...|..
 Worm   427 VKWLAPETLSTLSFSFATDTYSWGVTCYEVFADGVEPFFGIQNSVVKTDILANKFLQMPPTTPES 491

  Fly  1019 IYEMMRQAWDLNPAKRPTFAELKVKLQLLNNA 1050
            |.:.|..:..:..::|.|......:.:.:.:|
 Worm   492 IKKYMEASIFVEGSRRATMTSAIAEFEKIKSA 523

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CskNP_001262476.1 SH2_csk_like 680..777 CDD:198190 23/112 (21%)
PTKc_Csk_like 793..1047 CDD:270635 78/266 (29%)
STYKc 800..1044 CDD:214568 77/256 (30%)
T06C10.3NP_501307.1 SH2_Fps_family 138..236 CDD:198224 24/99 (24%)
TyrKc 263..517 CDD:197581 77/256 (30%)
PTKc 267..518 CDD:270623 77/253 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D539311at2759
OrthoFinder 1 1.000 - - FOG0000006
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.920

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