DRSC/TRiP Functional Genomics Resources

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Protein Alignment Csk and Y116A8C.24

DIOPT Version :9

Sequence 1:NP_001262476.1 Gene:Csk / 41398 FlyBaseID:FBgn0262081 Length:1052 Species:Drosophila melanogaster
Sequence 2:NP_001255917.1 Gene:Y116A8C.24 / 178481 WormBaseID:WBGene00013801 Length:528 Species:Caenorhabditis elegans


Alignment Length:453 Identity:125/453 - (27%)
Similarity:203/453 - (44%) Gaps:64/453 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   643 NASSAWSSGSTTAMNHASLSPTALAPQQGRSRC--------EVK-LNAMPWFHGSITRDEAEHLL 698
            :|.|..|..|..|.....|: |.|...:.:||.        |:: |..:.::||.:.||..|..|
 Worm    21 DAQSNRSRDSKVAPKSEGLA-TGLDETEWKSRLTTPEIVLKEIRTLEGVSYYHGMVARDLVESKL 84

  Fly   699 QPREDGLFLVRESTNFPGDYTLCVCFQSKVEHYRVKYLENKLTI--DDEEYFENLGQL-VAHYEA 760
              ...|.:|:|.:.|...::...:.|.:|      |.:.:.|||  |.|.....||.| |..:.:
 Worm    85 --TRCGDYLIRATDNRIMEFEFILSFFNK------KRIHSHLTIKCDVEAGKWALGLLSVNQFSS 141

  Fly   761 DADGLCTQLIKCLPKLGKQEFCINSKDFVDKG-WVIPEAELQLR---ESIGKGEFGDVMLG--IL 819
            ..|  .|...|..| :|...|.   |..:.|| ::|....::..   :.:|.|.|.||..|  .|
 Worm   142 VVD--LTNFYKTNP-IGAGFFL---KRAISKGKYMIAHDRIKYSPKDDLLGTGNFSDVFRGKIEL 200

  Fly   820 RNEKVAV---------------KMLKDEGAVQKFLAEASVMTTLEHDNLVKFIGLVFTSKHLYLV 869
            .|:.|.|               |.:|.....::.:.||.||:.|.|.|:..|.|:......:.|:
 Worm   201 ENQMVNVALKTTKLLDDTMDPTKNVKANKIKKEMIQEAEVMSQLRHANVTSFFGIAVDRLPILLI 265

  Fly   870 TEYMSKGSLVDYLRSRGRQHITKKDQIIFAYDTASGMEYLEAKKVVHRDLAARNVLISEDCVAKV 934
            .|:.:.|:|..:|...| ..|...::.::.:|.::|:.|:.|..:.|||:||||.|||.:...|:
 Worm   266 IEFCNGGNLQGHLIKFG-DRIGTNERFLYLHDASAGLNYIHAMSITHRDIAARNCLISVNGFVKL 329

  Fly   935 SDFGLA----REECYNL----DVG------KLPIKWTAPEALKN-GRFSNKSDMWSFGILLWEIY 984
            ||||:.    |.|....    |.|      |||::|.:||.:.. ..||..|||||.|||.:||:
 Worm   330 SDFGMGLKVRRNESAKKVAEDDDGKENKEPKLPVRWMSPELVDTPDAFSKMSDMWSLGILAYEIF 394

  Fly   985 SFGRVPYPRIPLADVVKHVEVGYKMEAPEGCPPEIYEMMRQAWDLNPAKRPTFAELKVKLQLL 1047
            :....|:..:...||::.|:.|.....|....|::..:::......|.:|.|..:...:|.:|
 Worm   395 TNATKPFFNLDDTDVMQTVKSGKHPPLPLSMGPDLIRLLKDVLVAAPTQRTTADKFYNELHVL 457

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CskNP_001262476.1 SH2_csk_like 680..777 CDD:198190 26/99 (26%)
PTKc_Csk_like 793..1047 CDD:270635 81/288 (28%)
STYKc 800..1044 CDD:214568 79/278 (28%)
Y116A8C.24NP_001255917.1 SH2 70..155 CDD:214585 26/95 (27%)
TyrKc 181..446 CDD:197581 78/265 (29%)
PTKc 183..454 CDD:270623 79/271 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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