DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Csk and K09B11.5

DIOPT Version :9

Sequence 1:NP_001262476.1 Gene:Csk / 41398 FlyBaseID:FBgn0262081 Length:1052 Species:Drosophila melanogaster
Sequence 2:NP_001040971.1 Gene:K09B11.5 / 178307 WormBaseID:WBGene00010712 Length:589 Species:Caenorhabditis elegans


Alignment Length:402 Identity:125/402 - (31%)
Similarity:187/402 - (46%) Gaps:65/402 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   679 LNAMPWFHGSITRDEAEHLLQPREDGLFLVRESTNFPGDYTLC--VCFQSKVEHYRVKYLENKLT 741
            |...||:||.:.....|.||  :.|..:|||.:........||  |....|:.|:         |
 Worm    71 LKFYPWYHGMMFGQTVEKLL--KWDYAYLVRRAMQRNSKKVLCLSVKIDGKICHF---------T 124

  Fly   742 IDDEEYFENLGQLVA-------------HYEADADGLCTQLIKCLPK--LGKQEFCINSKDFVDK 791
            ::..:...:.|:|:|             |:..||..|....|..:|:  |..|..||:       
 Worm   125 LNSNKDGWSCGKLLAKFPKITPKRFQHIHHLLDAWSLVVNSIVPVPRRQLVLQHNCIH------- 182

  Fly   792 GWVIPEAELQLRESIGKGEFGDVM------LGILRNEKVAVKML---KDEGAVQKFLAEASVMTT 847
                      |...:|.|.||:|:      .|.....:||||.:   .....:|:|..||.:|.|
 Worm   183 ----------LENILGNGAFGEVLKARYIPRGHTNGVEVAVKRVIGTAQREQMQEFCHEAQIMGT 237

  Fly   848 LEHDNLVKFIGLVFTSKHLYLVTEYMSKGSLVDYLRSRGRQHITKKDQIIFAYDTASGMEYLEAK 912
            |:|||:||..|:....:.:.||.|.::.|.|..||:|  ...|..:..|.||.|.|:||.:|..|
 Worm   238 LKHDNVVKLYGIASLEQPIMLVMELITGGDLKKYLQS--TPSIPNRQLIAFALDIANGMRHLVIK 300

  Fly   913 KVVHRDLAARNVLISEDCV-AKVSDFGLARE--ECYNLDVGKLPIKWTAPEALKNGRFSNKSDMW 974
            ||:||||||||.|||...: .|:||||||.:  |.....:.|.|.:|.|||..:.|.|:.|:|:|
 Worm   301 KVIHRDLAARNCLISRPTLQVKISDFGLAVQATEVIVKKLSKAPTRWLAPETFQKGIFNEKTDVW 365

  Fly   975 SFGILLWEIYS-FGRVPYPRIPLADVVKHVEVG---YKMEAPEGCPPEIYEMMRQAWDLNPAKRP 1035
            |||::|.||.: ....|.....|.:..|::...   :::|..|  |.|:.|::....|.|...|.
 Worm   366 SFGVVLTEILTRCAADPLAPRTLEECKKYIIESPHPHRIENKE--PKELAELVEMCCDKNTMCRA 428

  Fly  1036 TFAELKVKLQLL 1047
            .|...|.:|:::
 Worm   429 NFQNAKRRLKIV 440

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CskNP_001262476.1 SH2_csk_like 680..777 CDD:198190 26/113 (23%)
PTKc_Csk_like 793..1047 CDD:270635 94/269 (35%)
STYKc 800..1044 CDD:214568 93/259 (36%)
K09B11.5NP_001040971.1 SH2 74..160 CDD:214585 23/96 (24%)
TyrKc 181..437 CDD:197581 94/276 (34%)
PTKc 185..438 CDD:270623 92/256 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.