DRSC/TRiP Functional Genomics Resources

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Protein Alignment Csk and C55C3.4

DIOPT Version :10

Sequence 1:NP_731611.2 Gene:Csk / 41398 FlyBaseID:FBgn0262081 Length:1052 Species:Drosophila melanogaster
Sequence 2:NP_500846.1 Gene:C55C3.4 / 177346 WormBaseID:WBGene00016954 Length:431 Species:Caenorhabditis elegans


Alignment Length:427 Identity:123/427 - (28%)
Similarity:209/427 - (48%) Gaps:79/427 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   684 WFHGSITRDEAEHLLQPREDGLFLVRESTNFPGD---YTLCVCFQ--SKVEHYRVKYLENKLTID 743
            ::||.:.|::.:.:|  .:.|.||:|.|....|:   :.|.|..:  :...|:.|:..::|:.: 
 Worm    11 YYHGLLPREDIQEML--NKPGQFLLRTSEPVKGEKRQFVLSVVGEKNTSANHFVVREADHKVYV- 72

  Fly   744 DEEYFENLGQLVAHYEADADGLCTQ--LIKCLPKLGKQEFCINSKDFVDKGWVIPEAELQLRESI 806
            |:..|..:.:||.||.:..:...|:  .:|.:.|...:.          :.|.:...:::|.:.:
 Worm    73 DKIGFPTIIELVNHYVSTKES
FSTKDGTVKVVLKHAVER----------QKWELYHEDVELTKKL 127

  Fly   807 GKGEFGDVMLGIL-----RNEK---VAVKMLKDEG----AVQKFLAEASVMTTLEHDNLVKFIGL 859
            |:|.||:|..|.|     .|.:   ||||..|.|.    .:::.:.||.:|..|:|.|:|||.|:
 Worm   128 GEGAFGEVWKGKLLKILDANHQPVLVAVKTAKLESMTKEQIKEIMREARLMRNLDHINVVKFFGV 192

  Fly   860 VFTSKHLYLVTEYMSKGSLVDYLRSRGRQH--ITKKDQIIFAYDTASGMEYLEAKKVVHRDLAAR 922
            ...::.||::.|....|:|...|   |:.|  :.||.::|  |..|:|:.|:..|.::|||:|||
 Worm   193 AAGTEPLYVIMELADGGALDSAL---GKLHFPMIKKYELI--YQAANGLAYIHEKNLMHRDVAAR 252

  Fly   923 NVLISEDCVAKVSDFGLAREEC-YNLDV-GKLPIKWTAPEALKNGRFSNKSDMWSFGILLWEIYS 985
            |.|.....| |::||||:||.. |.:|: .|:||:|..||.:::|.::.|:|:::||::.|||..
 Worm   253 NCLYGGGQV-KIADFGLSREGADYTMDLKKKVPIRWLPPETIRSGLYTPKTDVFAFGVMAWEITE 316

  Fly   986 FGRVPYPRIPLADVVKHVEVGYKME-APE-----------GCPPEIYE---------------MM 1023
            .|:.|||...:.:|...|..||:|. :||           .|.||.||               :.
 Worm   317 DGKEPYPGFKVIEVAMKVLQGYRMPFSPEVNKEFAEFILTKCWPEKYEDRLPMKDICKWMKSSVK 381

  Fly  1024 RQAWDLNPA----------KRPTFAELKVKLQLLNNA 1050
            .|..|..|.          ||....|.|.|...:..|
 Worm   382 AQGGDTGPGGMMSKFGKKIKRSNSRESKSKSSTMTAA 418

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CskNP_731611.2 SH2_csk_like 680..777 CDD:198190 24/99 (24%)
PTKc_Csk_like 793..1047 CDD:270635 98/306 (32%)
C55C3.4NP_500846.1 SH2_Fps_family 4..93 CDD:198224 21/84 (25%)
TyrKc 121..376 CDD:197581 89/260 (34%)

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