DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Csk and src-2

DIOPT Version :9

Sequence 1:NP_001262476.1 Gene:Csk / 41398 FlyBaseID:FBgn0262081 Length:1052 Species:Drosophila melanogaster
Sequence 2:NP_493502.1 Gene:src-2 / 173296 WormBaseID:WBGene00005078 Length:507 Species:Caenorhabditis elegans


Alignment Length:512 Identity:181/512 - (35%)
Similarity:256/512 - (50%) Gaps:45/512 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   555 PPGGAGLM--SSSLNAAQMGMHGAERALPPKSLALSGSQHGSNMLLHTAPQPPQASQPAAVVGV- 616
            |||....:  ||:|....:..|....::.|.:.:.||         :|..:....||.|..|.: 
 Worm    11 PPGATSPVHTSSTLGRESLPSHPRIPSIGPIAASSSG---------NTIDKNQNISQSANFVALF 66

  Fly   617 SGSGSAGMSTSLHSFDINGVTAGSGVNASSAWSSGSTTAMNHASLSPTALAPQQGRSRCEVKLNA 681
            ..........|....||..:...         :.|......|.:...|...|....:| |..:.:
 Worm    67 QYDARTDDDLSFKKDDILEILND---------TQGDWWFARHKATGRTGYIPSNYVAR-EKSIES 121

  Fly   682 MPWFHGSITRDEAE----HLLQPREDGLFLVRESTNFPGDYTLCVCFQSKVEHYRVKYLEN-KLT 741
            .||:.|.:.|.:||    |.|  .|.|.||||:|.:...|.:|.|.....|:|||::.|:: ...
 Worm   122 QPWYFGKMRRIDAEKCLLHTL--NEHGAFLVRDSESRQHDLSLSVRENDSVKHYRIRQLDHGGYF 184

  Fly   742 IDDEEYFENLGQLVAHYEADADGLCTQL-IKCLPKLGKQEFCINSKDFVDKGWVIPEAELQLRES 805
            |.....|..|..|:|||:.:|||||..| ..|    .|.|....:....|..|.:....::|...
 Worm   185 IARRRPFATLHDLIAHYQREADGLCVNLGAPC----AKSEAPQTTTFTYDDQWEVDRRSVRLIRQ 245

  Fly   806 IGKGEFGDVMLGILR-NEKVAVKMLKDEGA-VQKFLAEASVMTTLEHDNLVKFIGLVFTSKHLYL 868
            ||.|:||:|..|... |..||||.||...| ...|||||.:|..|.|..|:....:....:.:.:
 Worm   246 IGAGQFGEVWEGRWNVNVPVAVKKLKAGTADPTDFLAEAQIMKKLRHPKLLSLYAVCTRDEPILI 310

  Fly   869 VTEYMSKGSLVDYLRSRGRQHITKKDQII-FAYDTASGMEYLEAKKVVHRDLAARNVLISEDCVA 932
            |||.|.: :|:.:|:.||||  .:..|:: .:...|:||.|||....:||||||||:||:.....
 Worm   311 VTELMQE-NLLTFLQRRGRQ--CQMPQLVEISAQVAAGMAYLEEMNFIHRDLAARNILINNSLSV 372

  Fly   933 KVSDFGLAR----EECYNLDVG-KLPIKWTAPEALKNGRFSNKSDMWSFGILLWEIYSFGRVPYP 992
            |::||||||    |..|....| :.|||||||||....||:.|||:|||||||.||.:|||:|||
 Worm   373 KIADFGLARILMKENEYEARTGARFPIKWTAPEAANYNRFTTKSDVWSFGILLTEIVTFGRLPYP 437

  Fly   993 RIPLADVVKHVEVGYKMEAPEGCPPEIYEMMRQAWDLNPAKRPTFAELKVKLQLLNN 1049
            .:..|:|::.|:.||:|..|.|||..:|::|:|.|..:|.|||||..|:.||:.|.|
 Worm   438 GMTNAEVLQQVDAGYRMPCPAGCPVTLYDIMQQCWRSDPDKRPTFETLQWKLEDLFN 494

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CskNP_001262476.1 SH2_csk_like 680..777 CDD:198190 37/102 (36%)
PTKc_Csk_like 793..1047 CDD:270635 115/261 (44%)
STYKc 800..1044 CDD:214568 112/251 (45%)
src-2NP_493502.1 SH3_Src_like 61..112 CDD:212779 8/59 (14%)
SH2_Src_Src42 120..215 CDD:198233 36/96 (38%)
PTKc_Frk_like 231..496 CDD:270653 117/267 (44%)
Pkinase_Tyr 240..489 CDD:285015 112/251 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0197
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D248674at33208
OrthoFinder 1 1.000 - - FOG0000006
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.820

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