DRSC/TRiP Functional Genomics Resources

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Protein Alignment Csk and src-1

DIOPT Version :10

Sequence 1:NP_731611.2 Gene:Csk / 41398 FlyBaseID:FBgn0262081 Length:1052 Species:Drosophila melanogaster
Sequence 2:NP_001364829.1 Gene:src-1 / 171722 WormBaseID:WBGene00005077 Length:537 Species:Caenorhabditis elegans


Alignment Length:525 Identity:180/525 - (34%)
Similarity:255/525 - (48%) Gaps:93/525 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   589 GSQHGSNMLLHTA--PQPPQASQPAAVVGVSGSGSAGMSTSLHSFDINGVTAGSGVNASSAWSSG 651
            ||..|.:..:..:  |:..|..|...|..|:..|:.|..:.|     ||.:.|...|.......|
 Worm    13 GSDMGVSERIDVSRYPRRFQTPQQQTVFHVNNGGNEGTISQL-----NGTSDGMMGNGRGGGGGG 72

  Fly   652 STTAMNHASLSPTALAPQQGR------------------SRC----------------------- 675
            .  |....:|  .||.|...|                  |.|                       
 Worm    73 G--AQERETL--VALYPYDSRADGDLSFQKGDAMYLLDHSNCDWWYVRHQRTGQTGYVPRNFVAK 133

  Fly   676 EVKLNAMPWFHGSITRDEAEHLL----QPREDGLFLVRESTNFPGDYTLCVCFQ------SKVEH 730
            :..:.:..|:.|.|.|:.||.|:    .|:  |.||:||......::.|.:...      ..|:|
 Worm   134 QQTIESEEWYAGKIPRNRAERLVLSSHLPK--GTFLIREREADTREFALTIRDTDDQRNGGTVKH 196

  Fly   731 YRVKYLENKLTIDDEEY-------FENLGQLVAHYEADADGLCTQLIKCLPKLGKQEFCINSKDF 788
            |::|.|::     |:.|       |.:|.:||.:|....||||.||....|:|......: |.| 
 Worm   197 YKIKRLDH-----DQGYFITTRRTFRSLQELVRYYSDVPDGLCCQLTFPAPRLAPTRPDL-SHD- 254

  Fly   789 VDKGWVIPEAELQLRESIGKGEFGDVMLGILRN-EKVAVKMLKDEGAV--QKFLAEASVMTTLEH 850
            ..:.|.||..:|.|:..:|.|.||:|..|..|. .:||:|.:| .|.:  :.||.||.:|...:|
 Worm   255 TQQNWEIPRNQLHLKRKLGDGNFGEVWYGKWRGIVEVAIKTMK-PGTMSPEAFLQEAQIMKQCDH 318

  Fly   851 DNLVKFIGLVFTSKHLYLVTEYMSKGSLVDYLRSRGRQHITKKDQIIFAYDTASGMEYLEAKKVV 915
            .||||...:....:..|::||||..|||:.|||:.| ..:..:..:..|...|:||.|||.:|:|
 Worm   319 PNLVKLYAVCTREEPFYIITEYMINGSLLQYLRTDG-STLGIQALVDMAAQIANGMMYLEERKLV 382

  Fly   916 HRDLAARNVLISEDC----VAKVSDFGLAR----EECYNLDVG-KLPIKWTAPEALKNGRFSNKS 971
            ||||||||||:.:..    |.||:||||||    |:.|....| |.|||||||||...|.|:.||
 Worm   383 HRDLAARNVLVGDKISGVPVVKVADFGLARKLMEEDIYEARTGAKFPIKWTAPEAATCGNFTVKS 447

  Fly   972 DMWSFGILLWEIYSFGRVPYPRIPLADVVKHVEVGYKMEAPEGCPPEIY-EMMRQAWDLNPAKRP 1035
            |:||:||||:||.:.|:||||.:...:||:.||:||:|..|.|||.:|| |::.:.||..|.:||
 Worm   448 DVWSYGILLYEIMTKGQVPYPGMHNREVVEQVELGYRMPMPRGCPEQIYEEVLLKCWDKTPDRRP 512

  Fly  1036 TFAEL 1040
            ||..|
 Worm   513 TFDTL 517

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CskNP_731611.2 SH2_csk_like 680..777 CDD:198190 33/113 (29%)
PTKc_Csk_like 793..1047 CDD:270635 120/261 (46%)
src-1NP_001364829.1 SH3_Src_like 79..130 CDD:212779 7/52 (13%)
SH2_Src_family 138..240 CDD:199827 32/108 (30%)
PTKc_Src_like 270..522 CDD:270630 115/250 (46%)

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